Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0730 ATGGAGGGAAAGGAGGAAGATGTTCGATTGGGAGCCAACAAGTTCAACGAGAGGCAGCCGATTGGGACGGCGGCGCAGACCCAAGATGAAGGCAAGGACTACAAGGAGCCACCGCCGGCTCCTCTGTTCGAGCCGGAGGAGCTCACTTCATGGTCCTTTTACAGAGCCGGAATCGCTGAGTTCTTCGCCACTTTCCTCTTCCTTTACATCACCGTTTTGACCGTCATGGGTGTGGTCCGCTCCAATGAAGCCAACGGCAACACCTGTAAGACCGTCGGAATTCAGGGCATTGCTTGGGCTTTCGGCGGTATGATTTTTGCGTTGGTTTACTGTACTGCTGGAATCTCCGGTGGCCATATTAATCCGGCGGTCACTTTTGGGCTGTTTCTGGCCAGGAAGCTGTCGTTGACTAGAGCCATTTTCTACATCGTGATGCAATGCCTAGGCGCTATCTGCGGCGCCGGCGTGGTGAAGGGATTCCAACCAAAGCCCTATGACAGACTTGGCGGTGGAGCTAACGTCGTCAACGCCGGATACACCAAGGGCGATGGCCTCGGCGCTGAGATTGTCGGTACCTTTATTCTTGTTTACACCGTCTTCTCCGCCACCGACGCCAAACGTAGCGCCAGAGACTCCCATGTTCCGATTTTGGCACCGCTACCAATTGGGTTTGCAGTGTTCCTAGTTCACTTGGCCACCATTCCGATCACCGGCACCGGCATCAACCCAGCCCGAAGTTTGGGCGCCGCCATCGTCTTCAACCACGACAAAGCCTGGGATCACCACTGGATTTTCTGGGTGGGACCATTCATCGGAGCAGCATTGGCAGCTTTATATCACCAAGTAGTAATTAGAGCAATTCCCTTCAAGTCCAAGTGA 879 54.27 MEGKEEDVRLGANKFNERQPIGTAAQTQDEGKDYKEPPPAPLFEPEELTSWSFYRAGIAEFFATFLFLYITVLTVMGVVRSNEANGNTCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQPKPYDRLGGGANVVNAGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNHDKAWDHHWIFWVGPFIGAALAALYHQVVIRAIPFKSK 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 70284768 70286504 + Hsped.01g07300.1 Hepe01g0730 559840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0730 292 SUPERFAMILY Aquaporin-like 46 285 IPR023271 -
Hepe01g0730 292 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe01g0730 292 PRINTS Major intrinsic protein family signature 223 245 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe01g0730 292 PRINTS Major intrinsic protein family signature 263 283 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe01g0730 292 PRINTS Major intrinsic protein family signature 101 125 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe01g0730 292 PRINTS Major intrinsic protein family signature 138 157 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe01g0730 292 PRINTS Major intrinsic protein family signature 187 205 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe01g0730 292 CDD MIP 55 283 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe01g0730 292 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 5 291 IPR034294 GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009414(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER)
Hepe01g0730 292 NCBIfam MIP family channel protein 59 280 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe01g0730 292 ProSitePatterns MIP family signature. 119 127 IPR022357 -
Hepe01g0730 292 FunFam Probable aquaporin PIP1-2 40 292 - -
Hepe01g0730 292 Gene3D Glycerol uptake facilitator protein. 40 291 IPR023271 -
Hepe01g0730 292 MobiDBLite consensus disorder prediction 1 39 - -
Hepe01g0730 292 Pfam Major intrinsic protein 47 280 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0730 Hepe-Chr1:70284768 Hepe08g0886 Hepe-Chr8:8024237 1.08e-140 dispersed
Hepe01g0730 Hepe-Chr1:70284768 Hepe01g0731 Hepe-Chr1:70307661 8.23e-190 tandem
Hepe06g1536 Hepe-Chr6:66057199 Hepe01g0730 Hepe-Chr1:70284768 9.54e-179 transposed
Hepe01g0730 Hepe-Chr1:70284768 Hepe05g0100 Hepe-Chr5:1167061 2.06e-36 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0730 K09872 - csv:101215145 563.918