Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe01g0731 | ATGGAAGGGAAGGAAGAAGATGTAAGGCTTGGAGCGAACAAGTTCAACGAGAGGCAGCCGATTGGAACGGCGGCGCAGAGCCAAGATGAAGGCAAGGACTACAAGGAGCCACCGCCGGCGCCGTTCTTCGAGCCGGAGGAGCTCACTTCATGGTCCTTTTACAGAGCCGGAATCGCTGAGTTCTTCGCCACTTTCCTCTTCCTTTACATCACCGTTTTGACCGTCATGGGTGTGGTCCGCTCCAATGAAGCCAACGGCAACACCTGTAAGACCGTCGGAATTCAGGGCATTGCTTGGGCTTTCGGCGGTATGATTTTCGCGTTGGTTTACTGTACTGCTGGAATCTCCGGTGGGCATATTAATCCGGCGGTCACTTTTGGGCTGTTTCTGGCCAGGAAGCTGTCGTTGACTAGAGCCATTTTCTACATCGTGATGCAGTGCCTAGGCGCTATCTGCGGCGCCGGCGTGGTGAAGGGATTCCAACCAAAGCCCTATGACAGACTTGGCGGTGGAGCTAACGTCGTCAACGCCGGCTACACCAAGGGTGACGGCCTCGGCGCCGAAATTGTCGGCACCTTTATCCTTGTTTACACCGTCTTCTCCGCCACCGACGCCAAACGTAGCGCCAGAGACTCCCATGTTCCGATTTTAGCACCGTTGCCAATTGGGTTCGCAGTGTTCTTAGTTCACTTGGCCACCATTCCGATCACCGGCACCGGTATCAACCCAGCTCGGAGTTTGGGCGCCGCCATCATCTTCAACCACGACAAAGCCTGGGATGATCACGTGGGTTTTCTTAATCTTAATTCATAA | 813 | 54.49 | MEGKEEDVRLGANKFNERQPIGTAAQSQDEGKDYKEPPPAPFFEPEELTSWSFYRAGIAEFFATFLFLYITVLTVMGVVRSNEANGNTCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQPKPYDRLGGGANVVNAGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNHDKAWDDHVGFLNLNS | 270 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 70307661 | 70309146 | + | Hsped.01g07310.1 | Hepe01g0731 | 559841 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe01g0731 | 270 | PRINTS | Major intrinsic protein family signature | 138 | 157 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe01g0731 | 270 | PRINTS | Major intrinsic protein family signature | 55 | 74 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe01g0731 | 270 | PRINTS | Major intrinsic protein family signature | 223 | 245 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe01g0731 | 270 | PRINTS | Major intrinsic protein family signature | 187 | 205 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe01g0731 | 270 | PRINTS | Major intrinsic protein family signature | 101 | 125 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe01g0731 | 270 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 5 | 265 | IPR034294 | GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009414(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER) | |
| Hepe01g0731 | 270 | Pfam | Major intrinsic protein | 47 | 262 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe01g0731 | 270 | CDD | MIP | 55 | 262 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Hepe01g0731 | 270 | Gene3D | Glycerol uptake facilitator protein. | 40 | 267 | IPR023271 | - | |
| Hepe01g0731 | 270 | ProSitePatterns | MIP family signature. | 119 | 127 | IPR022357 | - | |
| Hepe01g0731 | 270 | SUPERFAMILY | Aquaporin-like | 46 | 255 | IPR023271 | - | |
| Hepe01g0731 | 270 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
| Hepe01g0731 | 270 | FunFam | Probable aquaporin PIP1-2 | 40 | 267 | - | - | |
| Hepe01g0731 | 270 | NCBIfam | MIP family channel protein | 59 | 261 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe01g0731 | Hepe-Chr1:70307661 | Hepe06g1536 | Hepe-Chr6:66057199 | 3.32e-155 | dispersed | |
| Hepe01g0730 | Hepe-Chr1:70284768 | Hepe01g0731 | Hepe-Chr1:70307661 | 8.23e-190 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe01g0731 | K09872 | - | csv:101215145 | 504.597 |