Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0777 ATGGCCAATCGATGGTGGGCTGAAAATATACCCACCACAACAGATAGCAGCACCAGCAACCCTTATTCGACTCCATTAAAGCAAAGCTTAGAAGCTGCTGATGAAGAGAACAACTCCGGCAGCCAGGAGAGAGGCGAACCGGGAACCAGCTCCAGCACGCGTCGCCCACGTGGCCGGCCGCCGGGATCCAAAAACAAGCTGAAGCCGCCGGTGGTGGTCACGAAGGAGAGCCCCGATGCACTCCGGAGCCACGTATTGGAGATCGGCAGCGGTAGTGACATCGTGGAATGCATCTCTAACTTTGCTCAACGCCGCCAGCGAGGGGTTTCGGTCCTCAGCGGAAATGGGGTTGTCGCCAATGTCACTCTAAGGCATCCGGCCGCCCCCGGCGGTGTTATTACGCTACAGGGACGATTCGATATATTGTCGCTCTCCGGTGCCTTTTTGCCTTCCCCAGCTCCACCCGGGGCTACCGGGTTAACTGTCTACTTGGCTGGCGGGCAGGGGCAGGTCATTGGTGGCATTGTTGTCGGTGCACTCATTGCGACCGGTCCGGTTATCGTCATCGCTGCCACTTTCACCAACGCTACATTTGAGCGGCTGCCGCTCGAGGACGAGGAGGCAGCTGTTGCAGGAGATAAGTCTGGAACAAGCCAGAACAATTCAACTTCTCAGAGTATGGGGGAGCAACAGCAGCAGCAGCAACAACAGCAGCAGCAGCCTTCAATGGGAGTTTACAATATGGCTCCAAATTTGGTTCCAAATGGTCAGGTGACCAAGTGGAATATGAGTTTGGAGCTAGCCACAATATTCTTTGATCAGGTGGTTTGA 831 55.35 MANRWWAENIPTTTDSSTSNPYSTPLKQSLEAADEENNSGSQERGEPGTSSSTRRPRGRPPGSKNKLKPPVVVTKESPDALRSHVLEIGSGSDIVECISNFAQRRQRGVSVLSGNGVVANVTLRHPAAPGGVITLQGRFDILSLSGAFLPSPAPPGATGLTVYLAGGQGQVIGGIVVGALIATGPVIVIAATFTNATFERLPLEDEEAAVAGDKSGTSQNNSTSQSMGEQQQQQQQQQQQPSMGVYNMAPNLVPNGQVTKWNMSLELATIFFDQVV 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 71302353 71305827 + Hsped.01g07770.1 Hepe01g0777 559887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0777 276 MobiDBLite consensus disorder prediction 1 58 - -
Hepe01g0777 276 SUPERFAMILY AF0104/ALDC/Ptd012-like 79 209 - -
Hepe01g0777 276 CDD DUF296 82 165 IPR005175 -
Hepe01g0777 276 ProSiteProfiles PPC domain profile profile. 78 216 IPR005175 -
Hepe01g0777 276 FunFam AT-hook motif nuclear-localized protein 81 208 - -
Hepe01g0777 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 24 259 IPR014476 GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe01g0777 276 Gene3D - 81 211 - -
Hepe01g0777 276 MobiDBLite consensus disorder prediction 213 241 - -
Hepe01g0777 276 PIRSF ESCAROLA 7 269 IPR014476 GO:0003680(InterPro)
Hepe01g0777 276 MobiDBLite consensus disorder prediction 1 76 - -
Hepe01g0777 276 Pfam Plants and Prokaryotes Conserved (PCC) domain 82 194 IPR005175 -
Hepe01g0777 276 MobiDBLite consensus disorder prediction 208 241 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0777 Hepe-Chr1:71302353 Hepe05g1629 Hepe-Chr5:66159109 1.34e-77 dispersed
Hepe01g0777 Hepe-Chr1:71302353 Hepe02g3361 Hepe-Chr2:83180447 1.37e-73 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0777 - - - 0.0