Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe01g0778 | ATGACAGGGCTTACCTCTTCTTCTTCATCCTCTTCTTGTGGTGCCTGCAAGTTTCTTAGGCGAAAATGTAGTATTCAATGTATTTTTGCTCCTTTCTTCAGCTATGATGAAGGCACTTCCCATTTTGCAGCTGTTCATAAAGTGTTTGGTGCTAGTAATGTCTCTAAGCTTCTCTTACACCTCCCCATGCACATCCGAAGCCATGCTGCGATCACCGTCGCTTATGAAGCTCTCGAGCGAATGCGAGATCCAACCTATGGTTGCGTTGCGCATATCTTCTCGTTGCAGCAAGAGGTCGCAAGCTTGCAAGAGGAGATTGAAATTCTGGGGAGTCAAATAGCGAACTTCGCCAAGACCGGTAGCGTTGCGGCGGTCGAGAATCCGTTTAGAGAGCTTCAAGTCTCACAGCAGCTGGATGATTTTGGGATGAACACAAATGATTATCAAAATGAATTGCTTTCTCATGAGTTACCCCACCAAACTTTTGATCATGGCCAAAATGATAATAATGCTCAAATGATATCTCCATTGTTTTGTTTAGGGGAAGAAGAAGATGGATTTTTTGGGTGCAACCCAATAAATAATGTTGTGGAGAGATCAGCATTTGATGTTTCAATTGAAGAGGCTTTTGCTTGTTATCCATGGTAG | 648 | 43.21 | MTGLTSSSSSSSCGACKFLRRKCSIQCIFAPFFSYDEGTSHFAAVHKVFGASNVSKLLLHLPMHIRSHAAITVAYEALERMRDPTYGCVAHIFSLQQEVASLQEEIEILGSQIANFAKTGSVAAVENPFRELQVSQQLDDFGMNTNDYQNELLSHELPHQTFDHGQNDNNAQMISPLFCLGEEEDGFFGCNPINNVVERSAFDVSIEEAFACYPW | 215 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 71310361 | 71311575 | - | Hsped.01g07780.1 | Hepe01g0778 | 559888 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe01g0778 | 215 | Coils | Coil | 92 | 112 | - | - | |
Hepe01g0778 | 215 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 10 | 147 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) | |
Hepe01g0778 | 215 | ProSiteProfiles | LOB domain profile. | 11 | 113 | IPR004883 | - | |
Hepe01g0778 | 215 | Pfam | Lateral organ boundaries (LOB) domain | 12 | 108 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g0778 | Hepe-Chr1:71310361 | Hepe03g0462 | Hepe-Chr3:7030470 | 7.90e-45 | dispersed | |
Hepe01g0778 | Hepe-Chr1:71310361 | Hepe05g1877 | Hepe-Chr5:69076213 | 3.64e-42 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54779 | PF03195 | LOB | 2.60E-32 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe01g0778 | K13945 | - | csv:101204875 | 328.176 |