Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0808 ATGGAGGATTTTGTGAGGTTTTTGAGCTTGTCAAAGCCATATGTGGGAGTTATTTTTATGCAATTGGGTTTTGCTGGAATGGTGATTCTTGCAAAGTCAGCTTTGGACAAGGGCATGAGCCAATATGTTTTTGCGGTTTATCGTCAAGCTTTTGCGACTCTCGTCATCGCTCCTTTTGCCATTGTCTTCGATAGGAAAGCGAGGACGAAGATGACGTTTTCGTTGTTCTTCAAGATTGTGATGATGGGTTTATTAGAGCCAGTGCTCGATCAGAACTTGTACTACACTGGTATGATGTTCACAACAGCAACCTTTGCAGCTGCCATGTGCAATGTTCTACCAGCTTTTTCTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAATGTTTTGAAAAGGGGAAGCCAAGCAAAGATCCTAGGAACCATAGTGACAGTAGGAGGAGCCATGATTATGACCTTCATAAGTGGGCCCATGTTGAATCTTCCATGGACAAAATCCAACCATCTTTCTTCTTCTTCTTCAGCTGCTTCTTCTGCAAATCACCATAGCTCACTCAAGGGCTCCCTCATGATTGTAGTTGCCTGCCTTTGCTGGTCAGCTTTCATCACTCTTCAGGCGATTACATTGAAATCGTACCCGGCGGAGCTGTCGCTTACCGCGTTGATATGCTTGGTGGGTACCATTGGAGGCTCTGGGGTGGCTTTAGTCATGGAAAGGGGCAACCCTGCTGCTTGGTCTTTGCACTTTGACAGTCGGCTTCTGTCTGTTGTTTATGGGGGAGTAATATGTTCAGGGGTAACTTATTATATTCAAGGAGTGGTGATGCAAACAAAAGGACCTGTTTTTGTCACTGCATTCAGTCCTATGAGCATGATTCTTGTTGCAATCATGAGCTCCTTCATCTTGTCTGAGATAATGTTCTTGGGCAGGATTATTGGAGCAGTGGCCATAATCATTGGCTTGTACCTGGTTTTGTGGGGCAAAAGCAAAGATAAGCTTTCAGTTAAATCAGACTGTGATAAGATAACACCTTGTGAGCAACAAATGACTGGAAAGGACGAGGGTTCGAAGACGGTTCAATCAAGTCAGGAATTCGTGGCGCTTGATGTTACCAAAGAGGAGAGAAACTGA 1137 44.68 MEDFVRFLSLSKPYVGVIFMQLGFAGMVILAKSALDKGMSQYVFAVYRQAFATLVIAPFAIVFDRKARTKMTFSLFFKIVMMGLLEPVLDQNLYYTGMMFTTATFAAAMCNVLPAFSFLMAWACRLEKVNVLKRGSQAKILGTIVTVGGAMIMTFISGPMLNLPWTKSNHLSSSSSAASSANHHSSLKGSLMIVVACLCWSAFITLQAITLKSYPAELSLTALICLVGTIGGSGVALVMERGNPAAWSLHFDSRLLSVVYGGVICSGVTYYIQGVVMQTKGPVFVTAFSPMSMILVAIMSSFILSEIMFLGRIIGAVAIIIGLYLVLWGKSKDKLSVKSDCDKITPCEQQMTGKDEGSKTVQSSQEFVALDVTKEERN 378
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 71931813 71936243 + Hsped.01g08080.1 Hepe01g0808 559918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0808 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Hepe01g0808 378 PANTHER WAT1-RELATED PROTEIN 17 343 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Hepe01g0808 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 332 - -
Hepe01g0808 378 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020(InterPro)
Hepe01g0808 378 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0808 Hepe-Chr1:71931813 Hepe02g3012 Hepe-Chr2:79260776 1.56e-129 dispersed
Hepe01g0808 Hepe-Chr1:71931813 Hepe04g0877 Hepe-Chr4:63079465 8.97e-133 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0808 - - - 0.0