Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0809 ATGTCTTTCCAGCATAAAAGCTTTTGGATACCTAGGGATGCTGGATGTTTAACTGATGGAGAGATGAACTATGATAGCTCCTCCAGAATTGAAACGAAGCGTGGCCATCAATGGTTTATGGATGGCACTGCACCAGAGCTATTCAGTAACAAGAAGCAAGCAATAGAAACTGTAAATACTAGACCTGTTCCAGGAGTTCCGCACATGAATGTTTCTCCCTGGGAAAACTCTTCAAGTTTTCAGTCAGTTCCTGGGCCCTTCACTGATCGCCTCTTTGGCTCAGAGCCAATACGAACTGTTAACTTGGTTGATAGAGGCATCACTGTTGGAAATGCAAATATGGACATGGGAAGAAAGGAGTTCGAGAATCATTTTGCAAACAATCCATCAGTTGGCTTGTCCATGTCTCAATCCATTGAGGATTCCTCATCATGCCTCAATTTTGGTGGAATTAGAAAAGTTAAAGTCAATCAAGTCAGGGATCCTGACATTGGCATGTCTGCCTCTTTGGGGCATGCCTATAGCAGGGGTGATAATGGTACAATTTCAATGGGTACAACATTTAACAAAACTCATGAGAACGCCATATCATTGGGCCAAACTTATAATAGTAGAGATGAGAATACCATATCGGTTGGCCCTGCATATCACAAGACAGATGACAATTTTATTTCAATGGGTCATGCTTTCAAGGGTGATGGAAATTTTATTACTATTGGTCATAACTATAGCAAGGGAGACAATAGCATCCTATCAATGAGTCAACCTTTTGACAAGGGGGATGACTCTTTTATTTCAATGGGCCAGTCTTACGAGAAAGCAGAAGGTAATATCATTTCTTTTGGTTCCTACAATAAAGGGCACGAAAATTTTATCTCAATGGGGCCAACCTATAGTAAGGCAGGTGATTCTTTCATTTCAATGGCTTCCTCCTATAATAAGGGAAATGATGATAGCTTATCAATGGGTCCAACCTATGACAAGGTACACTCTGACATTGTACATGTGGGTCCTAAATATGACAAAGCAGATTCTGGTGCTGTGTCTATGGCTCACAACTATCATAAGGGTGAGAGTAATACCATATCTTTTGGAGGTTTTGATGATGAGAATGGGGCAGATAATCCTTCTGGTGGGATCATTAGCAGTTATGACTTGTTAATGGCTAATCAGGCTTCTGCCCAAGCATCAGAAGTATCAACCCTGAGAGATTCAGTTGATCCCAATGTGGAAGTAAATATTAACAATGCCATCAAAGTTGATGCTAAAATTGACACAAGTTCCAAGCATAAAGAGGCTAGGATGACTAAGAAGGTGCCACCAAATAGCTTCCCTTCAAATGTTAAAAGCTTGCTCTCAACTGGTATGCTTGATGGGGTTCCTGTGAAATATGTTTCTTGGTCACGGGAGAAAAATCTCAAGGGAATTATAAAAGGGACTGGATACTTGTGCAGCTGTGACAACTGCAATCATTCTAAGGCTCTCAATGCTTATGAATTTGAGAGGCACGCTGGCTGCAAAACCAAACATCCAAATAATCACATTTATTTCGAGAATGGTAAAACTATCTATGCTGTTGTTCAAGAGCTAAAGAACACCCCTCAGGAGATGCTATTTGATACAATTCAGAATGTGACTGGCTCTCCCATTAATCAGAAGCACTTTCGTATTTGGAAAGCATCTTATCAAGCTGCCACCCTTGAACTCCAGCGTATTTATGGAAAAGATGAAGTAATTATGCCTTCTTGA 1749 40.59 MSFQHKSFWIPRDAGCLTDGEMNYDSSSRIETKRGHQWFMDGTAPELFSNKKQAIETVNTRPVPGVPHMNVSPWENSSSFQSVPGPFTDRLFGSEPIRTVNLVDRGITVGNANMDMGRKEFENHFANNPSVGLSMSQSIEDSSSCLNFGGIRKVKVNQVRDPDIGMSASLGHAYSRGDNGTISMGTTFNKTHENAISLGQTYNSRDENTISVGPAYHKTDDNFISMGHAFKGDGNFITIGHNYSKGDNSILSMSQPFDKGDDSFISMGQSYEKAEGNIISFGSYNKGHENFISMGPTYSKAGDSFISMASSYNKGNDDSLSMGPTYDKVHSDIVHVGPKYDKADSGAVSMAHNYHKGESNTISFGGFDDENGADNPSGGIISSYDLLMANQASAQASEVSTLRDSVDPNVEVNINNAIKVDAKIDTSSKHKEARMTKKVPPNSFPSNVKSLLSTGMLDGVPVKYVSWSREKNLKGIIKGTGYLCSCDNCNHSKALNAYEFERHAGCKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDTIQNVTGSPINQKHFRIWKASYQAATLELQRIYGKDEVIMPS 582
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 71937427 71943038 - Hsped.01g08090.1 Hepe01g0809 559919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0809 582 PANTHER AUTOIMMUNE REGULATOR 6 563 - GO:0000977(PANTHER)|GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0042393(PANTHER)|GO:0045944(PANTHER)
Hepe01g0809 582 Pfam Tify domain binding domain 475 530 IPR032308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0809 Hepe-Chr1:71937427 Hepe05g0189 Hepe-Chr5:2366188 2.27e-43 wgd
Hepe01g0809 Hepe-Chr1:71937427 Hepe08g0810 Hepe-Chr8:7277635 1.32e-96 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0809 - - - 0.0