Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0838 ATGGTGGGCTCTGAGGAGGACTCTGCTACTTCTGGGGCTGCGGTGCAGATTTCTGGTGGCAGTCGGAAATTGTTCTGGCGCTCGGCTTCATGGTCTGCGTCACGTTCCTCCCTTCACCATCCTGAAGTGAACAAAGATGGAGACCCCAATGGTGATAGTAATGGACCAAGCCGAATTTTCCCTGCTCCATTAACTCCGAGATCACAGCAGCATTGCAAAGCAAGGTCGTGTTTGCCTCCTTTACAACCTCTGTCGATAGCCCGGCGAAGCTTGGATGAATGGCCGAAGGCGGGGTCGGACGATATAGGCGAGTGGCCGCAACCTCCTACTCCAAGTGGCCGAGGAAATGGCGAGAGGTTGAAACTTGATTTGTCGACAATTCAGCGAAACCCGGATAAGAATTGTGGGCTTGTGAAGAGGGATAAGATTGCTTTCTTTGACAAAGAGTGTTCAAAAGTCGCGGAACATGTATATCTTGGTGGTGATGCGGTTGCTCGAGATAGGGATATACTTAAACAGAATGGAATTACTCATGTGTTGAATTGTGTAGGTTTTGTTTGCCCGGAGTACTTCAAAGACAATTTCGTGTACAGAACTTTGTGGTTGCAGGATAGCCCATCTGAGGATATTACTAGTATTCTTTATGATGTTTTTGACTACTTTGAAGATGTTAGAGAACAAAATGGAAGGGTTTTTGTTCATTGTTGCCAGGGAGTATCACGGTCGACGTCCTTGGTGATTGCCTATCTGATGTGGAGAGAAGGGCAGAGTTTTGATGATGCATTTCAATATGTGAAGGCAGCAAGAGGTATTGCCGACCCGAATATGGGTTTTGCTTGCCAGTTATTACAGTGCCAAAAGAGGGTCCATGCTTTCCCTCTTAGCCCAAGTTCACTGTTGAGGATGTACAGAGTTGCTCCACACTCACCATATGATCCTTTGCATTTGGTCCCCAAAATGTTAAATGATCCTTCACCCTCAGCTCTGGATTCTAGAGGTGCATTTATCATTCATATACCCTCTGCCATATTTCTTTGGATTGGTAAGAACTGTGAAGCAATCATGGAAAGGGATGCGAGGGGAGCTGTTGTACAGATTGTTCGGTATGAGAGAGTGCAAGGGCCTATATATGTAATTAAGGAAGGGGAAGAACCAACACACTTTTGGGATTCTTTTGCTAACCTGTTACCTTTAATGGATAAATCTAACAGTAAAATCGATCTTGGGGAATCAAAAGTTAAGCCTTATCTAGGCGTAAGGAAAGTTGTTTCCTATGATGTGGATTTTGAAATTTTCCAGAAGGCTATTACTGGTGGTTTTGTTCCTCCATTTCCTTCATCTGAGAACGAGCATGAAACCCATCTCCCTGTTAGAGAAAGCAGTTGGAGTATGCTTAGGCGTAAGTTTGCCTCTGGGAATATGAAAGAGTTTGTATCAGCTCCTCGAAAATCTCTCTCTAGGGTCTATTCAGACTCGTTGATGATGGTGCATTTGTCTGCAAAATCTTCATCACCTTCGGCATTTTCTTTGTCTTCATCATCTTCTTCACCTATCTATCTTTCTCCAGACTCCCTCTCTTCTGATTCAAGTTCAAGTTCCAAGTATTTTTCAGAATCCTCTTTAGATTCTCCATCTGCTTCTTCACCTTCAGTTCCAGTTTCTTCATCTCTGTCTAGTTTTTCTAACATGTCTCTTATCTCATCCAAAAATTCCTTAGAATTTGTGCCCAATGGTCCAGAAATTCGTGATGCAGTCCCTTTGGAATCAAGTTCTAGCTCATTTTCATTCCCATCCAAAAAGTTCTCACCTTCTCTTGCAGAACGCCGAGGTAGTGCAAAATCTCTGACATTGCCTACAATGCCTAGTAAAATCAGAGCAACAAATAGTGCCTCAAGGTTTCTTGCCACTCAAGAGGATGTTAAGAGGAAAAACAAGATTTCTTGCTCTCTTAATGTATCAATTAATATGAAAAATAGCTCAGAGCCTATAGATAGGGTTGAAAATGAACAGACAAGTTCTGCTCAGAATTTCAAGAATATTGAAAGTGGAATGGATGCAAGGGTAGGTAGTGTGGCCTCGTGTCAGCAGGAAACTAAAGTTGCTAGACAATCTGCCTGTTCATGGAAAAGCTATCCCAAACTTTTTGAAGAAGGCATGGTATCCACTGTGTCAAATGGGATAAAAGATGATGAGTTTGTCCAACCTATGGTATACTGTTGGCCGGAGTTAGAAAAGATCGCAGCTTTTGACACAAGTTACCTCAATTCTAAAGCTGCTGTAGTGATTTTCTCTCCAAGTAGGTATTTAGGCAAGAAGGATGACATGATGCTGTATATTTGGGTAGGAAGTTCTTTTGATCATGATTTATCTCGGGTTCAAGTAAAGAGGGATAAAGACTTGGTTGATTTAGAAAAGATAGACTGGGTTAAAGTTGGTCAATATGTACTTACTGAAATAGGTCTGCCAGAAAATACAGAAATTAAGATAGTTAAAGAAGGTGAAGAAACAGAGGAATTTCTTGCACGATTGAGTCTGTTGTAG 2541 42.19 MVGSEEDSATSGAAVQISGGSRKLFWRSASWSASRSSLHHPEVNKDGDPNGDSNGPSRIFPAPLTPRSQQHCKARSCLPPLQPLSIARRSLDEWPKAGSDDIGEWPQPPTPSGRGNGERLKLDLSTIQRNPDKNCGLVKRDKIAFFDKECSKVAEHVYLGGDAVARDRDILKQNGITHVLNCVGFVCPEYFKDNFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRVAPHSPYDPLHLVPKMLNDPSPSALDSRGAFIIHIPSAIFLWIGKNCEAIMERDARGAVVQIVRYERVQGPIYVIKEGEEPTHFWDSFANLLPLMDKSNSKIDLGESKVKPYLGVRKVVSYDVDFEIFQKAITGGFVPPFPSSENEHETHLPVRESSWSMLRRKFASGNMKEFVSAPRKSLSRVYSDSLMMVHLSAKSSSPSAFSLSSSSSSPIYLSPDSLSSDSSSSSKYFSESSLDSPSASSPSVPVSSSLSSFSNMSLISSKNSLEFVPNGPEIRDAVPLESSSSSFSFPSKKFSPSLAERRGSAKSLTLPTMPSKIRATNSASRFLATQEDVKRKNKISCSLNVSINMKNSSEPIDRVENEQTSSAQNFKNIESGMDARVGSVASCQQETKVARQSACSWKSYPKLFEEGMVSTVSNGIKDDEFVQPMVYCWPELEKIAAFDTSYLNSKAAVVIFSPSRYLGKKDDMMLYIWVGSSFDHDLSRVQVKRDKDLVDLEKIDWVKVGQYVLTEIGLPENTEIKIVKEGEETEEFLARLSLL 846
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 72344997 72351023 - Hsped.01g08380.1 Hepe01g0838 559948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0838 846 PANTHER MKPA PROTEIN 15 841 - -
Hepe01g0838 846 SMART VILL_6 298 395 IPR007122 GO:0051015(InterPro)
Hepe01g0838 846 Gene3D Protein tyrosine phosphatase superfamily 136 291 IPR029021 -
Hepe01g0838 846 MobiDBLite consensus disorder prediction 35 76 - -
Hepe01g0838 846 CDD DSP 150 284 - -
Hepe01g0838 846 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 208 269 IPR000387 GO:0016311(InterPro)
Hepe01g0838 846 SUPERFAMILY Actin depolymerizing proteins 296 397 - -
Hepe01g0838 846 MobiDBLite consensus disorder prediction 589 614 - -
Hepe01g0838 846 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 144 290 IPR029021 -
Hepe01g0838 846 ProSiteProfiles Dual specificity protein phosphatase domain profile. 149 291 IPR020422 GO:0006470(InterPro)
Hepe01g0838 846 SMART dsp_5 149 288 IPR020422 GO:0006470(InterPro)
Hepe01g0838 846 Pfam Dual specificity phosphatase, catalytic domain 157 287 IPR000340 GO:0016311(InterPro)
Hepe01g0838 846 MobiDBLite consensus disorder prediction 96 117 - -
Hepe01g0838 846 Gene3D Severin 300 395 IPR029006 -
Hepe01g0838 846 ProSitePatterns Tyrosine specific protein phosphatases active site. 233 243 IPR016130 GO:0016311(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0838 Hepe-Chr1:72344997 Hepe10g1579 Hepe-Chr10:52511340 1.08e-178 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0838 - - - 0.0