Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe01g0842 | ATGGCCATTGAGGTTGCTGTCAAGGCTGCCTCTGGTGCACCCGATGTTCTTGGAGACTGCCCTTTCACCCAGAGGGTTCTATTAACTTTGGAGGAGAAGAAAATTCCTTACAAATTGCATCTCATCAATTTATCCGACAAACCCAGTTGGTTCTTGGAAGTGAGCCCAGAAGGGAAGGTGCCGGTGGTGAAGTTTGATGACAAATGGGTTCCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTATCCAGAGCCTTCTCTTGTTACTCCTGAATTTTCTTTTGTAAACTACAACTTAATTGATAGAAACAATACGTGCAAAGACGTCCAAGTATTACAGAAGTTTTTGCCAGTTGGAAGTTATCAAGCAGAATCGTCCCAAACCATCAAATTCCAAAGTGTTTCCATAGACCTACCTAGCCTCATCTTGAAAGATTCAGTTGTTTCTTTTACCCAATCCATAACAATTATGATTGTATTACATAAAGGCATTAGGTATATAGACTTTGCTAGCTTCTTAGATTACCTGCAGTCTGAAATCTACTGGTTGCTTTCAAACTCAAATAAACTTGAACCTCGCGGTAATGGAGTGTATGACTTATAG | 609 | 40.56 | MAIEVAVKAASGAPDVLGDCPFTQRVLLTLEEKKIPYKLHLINLSDKPSWFLEVSPEGKVPVVKFDDKWVPDSDVIVGILEEKYPEPSLVTPEFSFVNYNLIDRNNTCKDVQVLQKFLPVGSYQAESSQTIKFQSVSIDLPSLILKDSVVSFTQSITIMIVLHKGIRYIDFASFLDYLQSEIYWLLSNSNKLEPRGNGVYDL | 202 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 72422426 | 72433826 | - | Hsped.01g08420.1 | Hepe01g0842 | 559952 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe01g0842 | 202 | CDD | GST_N_family | 20 | 77 | - | - | |
| Hepe01g0842 | 202 | Gene3D | Glutaredoxin | 1 | 89 | - | - | |
| Hepe01g0842 | 202 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 10 | 88 | IPR004045 | - | |
| Hepe01g0842 | 202 | Pfam | Glutathione S-transferase, N-terminal domain | 20 | 82 | IPR004045 | - | |
| Hepe01g0842 | 202 | SUPERFAMILY | Thioredoxin-like | 19 | 87 | IPR036249 | - | |
| Hepe01g0842 | 202 | PANTHER | GLUTATHIONE S-TRANSFERASE DHAR2-RELATED | 3 | 93 | IPR044627 | GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro) | |
| Hepe01g0842 | 202 | FunFam | Glutathione S-transferase DHAR3 chloroplastic | 1 | 89 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe01g0842 | Hepe-Chr1:72422426 | Hepe02g0994 | Hepe-Chr2:12134834 | 2.69e-35 | dispersed | |
| Hepe01g0842 | Hepe-Chr1:72422426 | Hepe01g0844 | Hepe-Chr1:72439030 | 1.52e-58 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe01g0842 | K21888 | - | mdm:103433463 | 174.096 |