Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0842 ATGGCCATTGAGGTTGCTGTCAAGGCTGCCTCTGGTGCACCCGATGTTCTTGGAGACTGCCCTTTCACCCAGAGGGTTCTATTAACTTTGGAGGAGAAGAAAATTCCTTACAAATTGCATCTCATCAATTTATCCGACAAACCCAGTTGGTTCTTGGAAGTGAGCCCAGAAGGGAAGGTGCCGGTGGTGAAGTTTGATGACAAATGGGTTCCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTATCCAGAGCCTTCTCTTGTTACTCCTGAATTTTCTTTTGTAAACTACAACTTAATTGATAGAAACAATACGTGCAAAGACGTCCAAGTATTACAGAAGTTTTTGCCAGTTGGAAGTTATCAAGCAGAATCGTCCCAAACCATCAAATTCCAAAGTGTTTCCATAGACCTACCTAGCCTCATCTTGAAAGATTCAGTTGTTTCTTTTACCCAATCCATAACAATTATGATTGTATTACATAAAGGCATTAGGTATATAGACTTTGCTAGCTTCTTAGATTACCTGCAGTCTGAAATCTACTGGTTGCTTTCAAACTCAAATAAACTTGAACCTCGCGGTAATGGAGTGTATGACTTATAG 609 40.56 MAIEVAVKAASGAPDVLGDCPFTQRVLLTLEEKKIPYKLHLINLSDKPSWFLEVSPEGKVPVVKFDDKWVPDSDVIVGILEEKYPEPSLVTPEFSFVNYNLIDRNNTCKDVQVLQKFLPVGSYQAESSQTIKFQSVSIDLPSLILKDSVVSFTQSITIMIVLHKGIRYIDFASFLDYLQSEIYWLLSNSNKLEPRGNGVYDL 202
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 72422426 72433826 - Hsped.01g08420.1 Hepe01g0842 559952
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0842 202 CDD GST_N_family 20 77 - -
Hepe01g0842 202 Gene3D Glutaredoxin 1 89 - -
Hepe01g0842 202 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Hepe01g0842 202 Pfam Glutathione S-transferase, N-terminal domain 20 82 IPR004045 -
Hepe01g0842 202 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Hepe01g0842 202 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 3 93 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
Hepe01g0842 202 FunFam Glutathione S-transferase DHAR3 chloroplastic 1 89 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0842 Hepe-Chr1:72422426 Hepe02g0994 Hepe-Chr2:12134834 2.69e-35 dispersed
Hepe01g0842 Hepe-Chr1:72422426 Hepe01g0844 Hepe-Chr1:72439030 1.52e-58 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0842 K21888 - mdm:103433463 174.096