Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0844 ATGGTCCTCGAAGTTGCTGTCAAGGCTGCCGTTGGTGCACCCGATGTTATTGGGGACTGCCCTTTCAGCCAGAGGGTACTCTTAACTTTAGAGGAGAAGAAAGTTCCTTACAAATTGCATCTCATCAATCTCTCCGACAAACCCAGTTGGTTTTTGGAAGTGAGCCCTGAAGGGAAGGTGCCTGTGGTGAAGTTTGATGAGAAATGGGTTCCTGATTCTGATGTCATTGTGGGGATTCTTGAGGAGAAGTATCCTGAGCCTTCTCTTGTTACTCCTCCTAAATTTTCTTCTGTGTAA 297 46.13 MVLEVAVKAAVGAPDVIGDCPFSQRVLLTLEEKKVPYKLHLINLSDKPSWFLEVSPEGKVPVVKFDEKWVPDSDVIVGILEEKYPEPSLVTPPKFSSV 98
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 72439030 72439503 - Hsped.01g08440.1 Hepe01g0844 559954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0844 98 Gene3D Glutaredoxin 1 89 - -
Hepe01g0844 98 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 88 IPR004045 -
Hepe01g0844 98 CDD GST_N_family 20 77 - -
Hepe01g0844 98 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 3 98 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
Hepe01g0844 98 FunFam Glutathione S-transferase DHAR3 chloroplastic 1 89 - -
Hepe01g0844 98 SUPERFAMILY Thioredoxin-like 19 87 IPR036249 -
Hepe01g0844 98 Pfam Glutathione S-transferase, N-terminal domain 20 82 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0844 Hepe-Chr1:72439030 Hepe02g0994 Hepe-Chr2:12134834 9.16e-40 dispersed
Hepe01g0842 Hepe-Chr1:72422426 Hepe01g0844 Hepe-Chr1:72439030 1.52e-58 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0844 K21888 - csv:101203666 181.415