Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0852 ATGATACTCTCAGAGCCTCCAAAGAGCAACAACACCACAAAATTAATGCACATCAAAGAATTCTTTGGCTTCTCTCACTCTTCTTCCTCTTCTTCCTTCCCCACCACCGTCCGCCGGTTACCGCCCCCGCCGAGCTATGACCCTTCACAATCGGCAGCCATGGAAGAAGCCATCATCAACTCCGACCCCATCATCACCAAATGGGACCCGGATTCTTCCGAGTTCAACCGAATCACCTTCCTCTTCCGCCACGGCCGAGCCGAATCCGACCAGTTTCTCGACTCCGTCAACCGCCTCCGTCGAGCAATGGACTTTTTCATATCCAAAAACTCCACCTCCGACGCCCTTGTTCTCGCTCAAAAGTTGATGCAGGCCGCCATGAGACGACTCGAGAAGGAATTTTACTATATTTTGAGTGAGAATCGGCAAAATCTCGACCCGGAATCCATCTCCGGTCGTTCCTCCGACCGGTCCACGGTCGACGGAGAAACCGGTGGGGATTCCGTCACCGAATTCGACAGAGTCTCGGCTGATTTGAAATTGATTGCGGATTGTATGATCGATTCTGGGTATGGGAAAGAATGCGTTAAAATCTATAAAGTAATTCGAAAATCGATCGTCGATGAAACTCTGTACCGGCTAGGAACAGAGAAGTTCAAAATTTCGAGAATTCAGAGATGGAATTGGGATTCAATCGAGAACGTGATCAAGAATTGGATGGATTCAATTAAGATCTCTGTGAATACTCTGTTTCGTGGGGAGAAATTTCTCTGTGATAATGTTTTTTCGAGATCGGACAGAATCAGAGAGTCCTGTTTTTCCGAGATCACAAAAGAAGGCGCAATCACTTTATTCAAATTCCCGGAATTAATCGCAAAAGGGAAGAAAGATCCAGAGAAAATCTTTCTGTTAATGGAGCTTTACGAGGCGAATTCCGACATCTTGCCGGAAGTCGAAGTCATATTCGACTCTGTTTCTACATCCGCCATTAAAATTCAAGCCGAAACGTCAATGGCGAAACTCGCGGATTCAATCCGCGTCATTCTGTCTGAATTCGAGTCGACAATTCAGAGAGATTCGTCCAAAAGTCCGGCACCCGGCGGCGGAATCCACCCACTGACCCGATCGGCGATGAACTATATATCGTCGTTAGGAGATTATAGTGCGACCCTCTCCGACGTACTCGCCGCCGGAAACTCATCGATTCCGGCGTCGTACATGGAAACCCAAGCCGCCGACGACGCTCTGTCATCTCCGGTGGCGGCACAAATCGGGTGGCTAGTTCTAGTCCTCCTCTGCAAACTCGACACAAAAGCAGAGCTCTACAAAGACGTATCCCTCTCCTATCTCTTCCTCGCCAACAACCTGAACTTCATCGTGAAGACGGCGACAGCGACAAATCTGAAGACCCTCGTCGGCGGCGAGTGGGTGGCGAATCACACAACCAAAGTAAAGCTGTACGCGGCGAATTACGAAGCGACGGCGTGGAACAGAGTGCTGGCATCGCTGCCGGAGAGGGGGTGGTCGGAATCGGAAGATGGGTCGGCGGAGATGGCGGCGGAGGAGGGGTTTAAGAAATTCAATGCGGCGTTCGAAGAGGCGTACCGGAAACAGACGTCGTGGAGAGTGGAGGAGGGGAAATTGAGAGACGAATTGAAGACGTCGATCGCGAGGAAAGTGGTGGCGAAGTATAAGGAATTTTATGAAGATTGTGTTGAGAGGAATAATAATGGGAAGGGATTTGGAGTGAGATTTTCGCCGGAGGATTTGGGGAATTATTTGTCGGATTTGTTTCATGGAGGTTCTTCTCCGGGGAGTGGGAGTACTTCTTCTTCTTCTTCGTTTGGGAGCGTGAAGGAAAAAAGATGA 1869 49.49 MILSEPPKSNNTTKLMHIKEFFGFSHSSSSSSFPTTVRRLPPPPSYDPSQSAAMEEAIINSDPIITKWDPDSSEFNRITFLFRHGRAESDQFLDSVNRLRRAMDFFISKNSTSDALVLAQKLMQAAMRRLEKEFYYILSENRQNLDPESISGRSSDRSTVDGETGGDSVTEFDRVSADLKLIADCMIDSGYGKECVKIYKVIRKSIVDETLYRLGTEKFKISRIQRWNWDSIENVIKNWMDSIKISVNTLFRGEKFLCDNVFSRSDRIRESCFSEITKEGAITLFKFPELIAKGKKDPEKIFLLMELYEANSDILPEVEVIFDSVSTSAIKIQAETSMAKLADSIRVILSEFESTIQRDSSKSPAPGGGIHPLTRSAMNYISSLGDYSATLSDVLAAGNSSIPASYMETQAADDALSSPVAAQIGWLVLVLLCKLDTKAELYKDVSLSYLFLANNLNFIVKTATATNLKTLVGGEWVANHTTKVKLYAANYEATAWNRVLASLPERGWSESEDGSAEMAAEEGFKKFNAAFEEAYRKQTSWRVEEGKLRDELKTSIARKVVAKYKEFYEDCVERNNNGKGFGVRFSPEDLGNYLSDLFHGGSSPGSGSTSSSSSFGSVKEKR 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 72523176 72525129 - Hsped.01g08520.1 Hepe01g0852 559962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0852 622 MobiDBLite consensus disorder prediction 26 49 - -
Hepe01g0852 622 SUPERFAMILY Cullin repeat-like 81 599 IPR016159 -
Hepe01g0852 622 MobiDBLite consensus disorder prediction 147 165 - -
Hepe01g0852 622 PANTHER EXOCYST COMPLEX PROTEIN EXO70 48 600 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Hepe01g0852 622 MobiDBLite consensus disorder prediction 601 616 - -
Hepe01g0852 622 MobiDBLite consensus disorder prediction 147 167 - -
Hepe01g0852 622 MobiDBLite consensus disorder prediction 601 622 - -
Hepe01g0852 622 Pfam Exocyst complex component Exo70 N-terminal 64 140 - -
Hepe01g0852 622 Gene3D Exocyst complex component Exo70 64 604 - -
Hepe01g0852 622 Pfam Exo70 exocyst complex subunit C-terminal 237 596 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0852 Hepe-Chr1:72523176 Hepe05g0204 Hepe-Chr5:2514074 6.22e-168 dispersed
Hepe10g0323 Hepe-Chr10:3450110 Hepe01g0852 Hepe-Chr1:72523176 1.32e-30 transposed
Hepe01g0852 Hepe-Chr1:72523176 Hepe04g0889 Hepe-Chr4:63184253 1.22e-116 wgd
Hepe01g0852 Hepe-Chr1:72523176 Hepe05g0203 Hepe-Chr5:2507206 1.12e-165 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0852 K07195 - csv:101221801 959.518