Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0857 ATGAGAGCTGTAAATTCCATTTTTCTCATCTGTGTTCTTTGTGTTCTGTGTTTATCATCAGGATTCACTCCTGATGATAATTTTCTGATCGATTGTGGATCATCTTCCAATAATACAGTGGGAGGTCGTCAATTTCTATCTGGTGATCTTTTCTCTGATATTCTTTTAAACCCTAATGGGAAATCTGTTTCCACTACAAGCAATGTATCTAGTTCATCTCCATTATTCTTATTCTCACCTCTCTTTCAAACTGCAAAAGTATTTGAAACAACTTCTCAATACAACTTCAAAATAAAGAAACAGGGCAGGCACTGGATCCGTTTATACTTTTACCCTTTTGTTTCTGGAAACTTCAACTTGAGTTTAGCTAGATTCTCAGTTTCTGCTCAGAATATCGCCCTTCTCAAAGAGTTTCAGATCGAAAGCGGCTCGGTAATCAAGGAATATTCTCTGAGTGTCACTTCCAGTAATCTTGTTCTTACATTCACTCCCATGGTGAATTCATTTGCCTTCATCAATGCCTTGGAAGTTGTTTCTGTCCCTAATGAATTGATTCCCTTGGCTGTCCCCAATGTTGAGAAGGTTGTGCAAAATTTGGGGAACAGGGCATTGGAGACAGTTGCTAGAGTGAATATGGGGAATGAAACCGTGTTTCCGAAGGACGATAATCTCTCGCGCGTTTGGGTTGCAGATGGTCCATTCTTGATGCATATCAATCGGGTTGTCGTCGGAAAATTTGTGTCGAATCTCACGAGAGTGAACATGACAAGAGACTCTGAAATTATGGCTCCTCGTTCTGTGTATGGAACTGCAACTCAGTTAGGAGCTGATGCGGATTTGAATGCTAATATTAATGTATCGTGGTCATTCGATGTCGATCCGGGCTATGAATATCTGATTCGTTTTCATTTCTGTGATATTGTAAGTCCTTCTCTTGGATTGTTGTTCTTCAATGTTTATGTTAACTCAGGGAAGGTTAAAGATCATCTTGACCTTAGTACTCTCACTTCAGACATCCTTGGTGCACCCTATGTTCTGGACACCATAGCCAGTCCAGTTGACAGCTCTAAGTTCAAAATAAGTGTTGGCCCTTCTAGTTTTCGTGATTACTCGGTTGCCATTCTTAACGGGCTTGAGATCATGAAAATAAGCGATTCTCGGGGGAGCCTTGATGAACCCCCCTTTGATTTACTCGCAAAGAAAGGTCCCAATGTGAAAGTTGGTCTTATAGCTGGCTTGGTTGCTGGACTGGTTTTGGCTGCTGTTTTGGCCACTCTTGTCATTGTGCTGTGCAGAAGAAGAAGAAGAAGATCGGCGCTTGTTCGTCACTTGAAGGAAGAGGAAAATTTTGGTGGGAACGGAAGAGAAAGCAACTATACTTTTGGTTCTGTTGCCTTTTCGAGCTCAAAGATCGGTTATCGATATCCTCTTGCAGCTATTATGGAAGCTACTGATCATTTTAGTGAAAGTTTAGCCATTGGCCTTGGTGGGTTTGGGAAAGTTTACAAGGGAATGTTGAGGGACAACACAGAAGTGGCAGTGAAAAGAGGGACTTCAAAATCTCAGCAGGGTCTTGCAGAGTTTCGAACCGAAATCGAGATGTTATCCCAATTTCGCCACCGTCATTTGGTATCTCTGATCGGGTACTGCGACGAGCAAAATGAGATGATTATAATTTATGAATACATGGAGAAAGGGACCGTCAAGGACCATTTGTATGGATCAGAACTTCCAAGTTTAAGCTGGAAACAAAGGCTTGAGATTTGCATTGGCTCAGCTAGAGGACTTCACTATCTTCACACTGGCTCCACAAAGGCAATCATACACAGAGATGTCAAAACTGCAAACATTCTTCTAGATCAAAACTACATGGCCAAAGTTGCAGACTTCGGACTCTCGAAGATTGGCCCCGAATTCGATAAGACTCATGTCAGTACAGCAGTAAAAGGAAGCTTCGGTTACCTCGATCCTGAGTATTTAACGATGCAGCAACTGACCGAGAAATCCGACGTGTACTCTTTTGGCGTGGTTATGTTTGAAGTCCTTTGCGGTAGGCCTGTCATTGATCCATCTCTTCCAAGGGAAAAGGTGAATTTAATTGAATGGGTAATGAGGAGGAAAGATAGAGATCAACTGGAGGCGATCGTAGACTCGCGCATTGTCAAGGAAATCAAGCTAGATTCTCTGAGAAAATACATAGAGACAGCCGAGAAATGTTTGGCAGAATGCGGCACCGATCGCCCGACGATGGGAAACGTTCTGTGGAATCTGGAATGTGCACTTCAACTCCAAGGGGATGAAAGATCTCACCATCCCAAGGAATCATCCTCACAAGCTGAGCTTGCCAACCACTGGGAGGCAAGTGTATCCACGACTCAATCCAGCACGGGAAGCGCGGTTGATATCGCCGGTATTTCGATGAGTAAGGTATTTGCTCAAATGGTGAGGGAAGATATGAGATAG 2463 42.96 MRAVNSIFLICVLCVLCLSSGFTPDDNFLIDCGSSSNNTVGGRQFLSGDLFSDILLNPNGKSVSTTSNVSSSSPLFLFSPLFQTAKVFETTSQYNFKIKKQGRHWIRLYFYPFVSGNFNLSLARFSVSAQNIALLKEFQIESGSVIKEYSLSVTSSNLVLTFTPMVNSFAFINALEVVSVPNELIPLAVPNVEKVVQNLGNRALETVARVNMGNETVFPKDDNLSRVWVADGPFLMHINRVVVGKFVSNLTRVNMTRDSEIMAPRSVYGTATQLGADADLNANINVSWSFDVDPGYEYLIRFHFCDIVSPSLGLLFFNVYVNSGKVKDHLDLSTLTSDILGAPYVLDTIASPVDSSKFKISVGPSSFRDYSVAILNGLEIMKISDSRGSLDEPPFDLLAKKGPNVKVGLIAGLVAGLVLAAVLATLVIVLCRRRRRRSALVRHLKEEENFGGNGRESNYTFGSVAFSSSKIGYRYPLAAIMEATDHFSESLAIGLGGFGKVYKGMLRDNTEVAVKRGTSKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDEQNEMIIIYEYMEKGTVKDHLYGSELPSLSWKQRLEICIGSARGLHYLHTGSTKAIIHRDVKTANILLDQNYMAKVADFGLSKIGPEFDKTHVSTAVKGSFGYLDPEYLTMQQLTEKSDVYSFGVVMFEVLCGRPVIDPSLPREKVNLIEWVMRRKDRDQLEAIVDSRIVKEIKLDSLRKYIETAEKCLAECGTDRPTMGNVLWNLECALQLQGDERSHHPKESSSQAELANHWEASVSTTQSSTGSAVDIAGISMSKVFAQMVREDMR 820
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 72660559 72664024 + Hsped.01g08570.1 Hepe01g0857 559967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0857 820 Gene3D - 202 384 - -
Hepe01g0857 820 Gene3D - 27 181 - -
Hepe01g0857 820 FunFam Receptor-like protein kinase FERONIA 203 385 - -
Hepe01g0857 820 ProSiteProfiles Protein kinase domain profile. 487 761 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g0857 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g0857 820 ProSitePatterns Protein kinases ATP-binding region signature. 493 515 IPR017441 GO:0005524(InterPro)
Hepe01g0857 820 SMART serkin_6 487 760 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g0857 820 MobiDBLite consensus disorder prediction 768 793 - -
Hepe01g0857 820 PANTHER OS07G0166700 PROTEIN 475 764 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Hepe01g0857 820 Pfam Malectin-like domain 30 383 IPR024788 -
Hepe01g0857 820 FunFam Putative receptor-like protein kinase 27 181 - -
Hepe01g0857 820 SUPERFAMILY Protein kinase-like (PK-like) 468 757 IPR011009 -
Hepe01g0857 820 Gene3D Phosphorylase Kinase; domain 1 455 562 - -
Hepe01g0857 820 MobiDBLite consensus disorder prediction 778 793 - -
Hepe01g0857 820 Gene3D Transferase(Phosphotransferase) domain 1 563 784 - -
Hepe01g0857 820 FunFam Receptor-like protein kinase FERONIA 563 780 - -
Hepe01g0857 820 FunFam receptor-like protein kinase FERONIA 453 562 - -
Hepe01g0857 820 Pfam Protein tyrosine and serine/threonine kinase 492 752 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g0857 820 CDD STKc_IRAK 493 758 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0857 Hepe-Chr1:72660559 Hepe08g0830 Hepe-Chr8:7511904 7.25e-261 dispersed
Hepe01g0857 Hepe-Chr1:72660559 Hepe06g0410 Hepe-Chr6:15484148 7.02e-261 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72448 PF12819 Malectin_like 1.80E-31 CL0202 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0857 - - - 0.0