Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0865 ATGGCGACTTCGACACTGGGCAGCACCATCGGGTTCTCACAGCCCTCGTCTTCCTCAGACATTTCAGTTTTTTGCATTCCCTTTCCAACCACCAGATTAAGATTCTCGACCACCATTTCTTCTCCTCTTAAGCTTCAAAAACAACCATCTAGAACAAGAGCCAGACCTGCAATTGCTGTGAAAATGGCTGCCGAAGCTTTTCAGGAAGTTCTTCCTCCAGCCCTCACTTCGTCTTCAGAACCACCTCCTATCTTTGATGGAACAACGAGGCTTTACATATCCTACACATGCCCTTATGCGCAGCGTGTGTGGATTACTCGGAACTGTAAGGGTTTGCAGAATAAGATACAATTGGTTCCATTAAATCTACAAGATAGGCCATATTGGTACAAGGAAAACGTTTACCTACCTAACAAGGTACCAGCTCTTGAACACAACAATGTAGTCAAAGGAGAGAGTCTTGACTTAATGAAATATATTGACAGCAATTTTGAGGGGCCTTCATTATTTCCTGATGATCATGGAAAGAGAGAGTTTGCTGAAGAGTTGATAAACTACATGGACTCTTTCAGGGGATCTGTGGTTTCTTCATTTAAAGGAGATGGTAATGAAGCTGATGTGGCGTTTGACTACCTCGAATCAGCTCTTTCAAAATATGAAGATGGCCCATTTTTTCTAGGCCAGTTTAGTCTGGTGGATATAGCTTATGCTCCGTTTATTGAAAGGTTTCAGCCGTTCTTATTGGAAGTAAAGACATATGACATCACTGCTGGCAGGCCAAAACTGGCAGCTTGGATTGAGGAGATGAACAAGATCGAGGCTTACCGACAAACAAAGAGCGACCCACAGGAGCTTGTTGATAGCTATAAGAAGCGGTTCTTGAAGGAGACCCCTTTGTGA 900 43.44 MATSTLGSTIGFSQPSSSSDISVFCIPFPTTRLRFSTTISSPLKLQKQPSRTRARPAIAVKMAAEAFQEVLPPALTSSSEPPPIFDGTTRLYISYTCPYAQRVWITRNCKGLQNKIQLVPLNLQDRPYWYKENVYLPNKVPALEHNNVVKGESLDLMKYIDSNFEGPSLFPDDHGKREFAEELINYMDSFRGSVVSSFKGDGNEADVAFDYLESALSKYEDGPFFLGQFSLVDIAYAPFIERFQPFLLEVKTYDITAGRPKLAAWIEEMNKIEAYRQTKSDPQELVDSYKKRFLKETPL 299
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 72752811 72758089 + Hsped.01g08650.1 Hepe01g0865 559975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0865 299 FunFam Glutathione S-transferase L2, chloroplastic 62 165 - -
Hepe01g0865 299 Pfam Glutathione S-transferase, N-terminal domain 91 167 IPR004045 -
Hepe01g0865 299 Pfam Glutathione S-transferase, C-terminal domain 208 267 - -
Hepe01g0865 299 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 87 168 IPR004045 -
Hepe01g0865 299 CDD GST_C_Lambda 173 290 - -
Hepe01g0865 299 Gene3D Glutaredoxin 62 165 - -
Hepe01g0865 299 FunFam Lambda class glutathione S-transferase 166 296 - -
Hepe01g0865 299 SUPERFAMILY Thioredoxin-like 77 169 IPR036249 -
Hepe01g0865 299 SUPERFAMILY GST C-terminal domain-like 164 293 IPR036282 -
Hepe01g0865 299 Gene3D - 166 296 - -
Hepe01g0865 299 PANTHER GLUTATHIONE S-TRANSFERASE L1 62 296 IPR044629 GO:0004364(PANTHER)|GO:0004364(InterPro)|GO:0010731(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0865 Hepe-Chr1:72752811 Hepe05g0219 Hepe-Chr5:2617925 3.56e-112 dispersed
Hepe01g0865 Hepe-Chr1:72752811 Hepe05g0218 Hepe-Chr5:2612097 1.03e-97 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0865 K00799 - csv:101220995 503.827