Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0949 ATGGGAAAGCTAAGCATGAGCTGCTGCAATGGCTTCCTTGAGAATTCAAAACCTTACTTTGCCATGATATCCTTACAATTTGGATATGCTGGCATGAACATCATCTCCAAAGTCTCTCTTAGTAGAGGGATGAGTCATTATGTCCTCGTCGTTTATCGACATGCTTTCGCTACCGCTTCCATTGCCCCCTTCGTTCTCTTCTTCGAACGGAGAGAACAGCCAAGGATAACACTCAAAGTTTTCATTCAAATATTTGCATTGGCTTTGCTTGGCCCGGTTATCGATCAAAATTTCTACTATGCTGGGTTGAAATATACTTCACCAACTTTCTCTTGTGCCATGAGCAACATGCTGCCTGCAATGACATTTGTAATGGCTGTGATCTTCAGGATGGAAAAATTGGACATGAAGAAAGTGAGATGCCAAGCAAAAGTTTTGGGAACTTTAGTGACAGTGGGTGGAGCAATGCTGATGACTTTGTACAAAGGTCCACTTCTTCAAATGGCTTGGTCTAAAAACTCTCATGTTTCCACAAATTCTAATGAACCCTCTGATGATATTGCCAACAAAAATTGGTTCAAAGGCTCCATTTTTCTCATCATTGCCACTCTTGCTTGGGCTTCTCTCTTTGTCTTGCAGAATCAAGCATTGAAGACATACAAGAACCACCAATTCACTCTCACCACATTGGTGTGTTTTCTTGGGACTTTGCAAGCCATAGCTGTGACTTTAGTAGCTGAGCACAAACCTTCTGTTTGGAGAATTGGTTGGGATATGAATCTCCTTGCTGCTGCCTATGCTGGAATTGTGACATCAAGTATTTCATACTATGTACAAGGGCTGGTAATGAAGAAGAGGGGACCTGTATTTGCAACTGCATTTAGCCCATTGATGATGATCATTGTAGCCATTTTGGGCTCTTTCATCCTTGCTGAAAAGATCTTTCTTGGAGGAATAATAGGATCCATCTTGATAGTGTTTGGGCTATATTCAGTACTTTGGGGGAAGCACAAAGAGAATTTGGAGATCAAAAGTGCTTCTGCTGATGATGAAATACCAGAAGTAATCAAAAGTGCTTCTTCTCAACCAAATAATAACAATATTGCAAATCTTGAAGCTAATGAGATGATGATCATGACACCCAATAAGCTAATTTCCAATAATAATTCAATTTTCATTTCCATGCCAAACCCAACCAAATCCCAAGAGAATAATTGA 1218 40.15 MGKLSMSCCNGFLENSKPYFAMISLQFGYAGMNIISKVSLSRGMSHYVLVVYRHAFATASIAPFVLFFERREQPRITLKVFIQIFALALLGPVIDQNFYYAGLKYTSPTFSCAMSNMLPAMTFVMAVIFRMEKLDMKKVRCQAKVLGTLVTVGGAMLMTLYKGPLLQMAWSKNSHVSTNSNEPSDDIANKNWFKGSIFLIIATLAWASLFVLQNQALKTYKNHQFTLTTLVCFLGTLQAIAVTLVAEHKPSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVMKKRGPVFATAFSPLMMIIVAILGSFILAEKIFLGGIIGSILIVFGLYSVLWGKHKENLEIKSASADDEIPEVIKSASSQPNNNNIANLEANEMMIMTPNKLISNNNSIFISMPNPTKSQENN 405
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 73883528 73888470 - Hsped.01g09490.1 Hepe01g0949 560059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0949 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 338 - -
Hepe01g0949 405 Pfam EamA-like transporter family 194 333 IPR000620 GO:0016020(InterPro)
Hepe01g0949 405 Pfam EamA-like transporter family 19 158 IPR000620 GO:0016020(InterPro)
Hepe01g0949 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
Hepe01g0949 405 PANTHER WAT1-RELATED PROTEIN 20 350 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0949 Hepe-Chr1:73883528 Hepe04g0525 Hepe-Chr4:57940368 6.80e-152 dispersed
Hepe01g0949 Hepe-Chr1:73883528 Hepe05g0662 Hepe-Chr5:10907759 7.19e-159 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0949 - - - 0.0