Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0959 ATGGATCAATTTCCCAAAGAACTCGACAAAGAATTTTTCAACACAGAGAAATTTGAAAGGGAAGAAGAAGAAGAAGACGACGACGACGACGAGCAAGAAGAAGATGGACAAGACGACTGGGACGATTGGAATGCAGACGAGGAAGAAGGCGAAGAAGCATTTGAATCGAATTTTCAGTGTTTGTTCTGCAACTCCAAGTATAATGACTGCGACACGCTGTTCAATCACTGCAATTCTGTCCACTATTTCGATTTTCACGGCATTAGGAGGGCTCTGGGTTTGGACTTTTATGGGTCGTTCAAAATTATCAACTATATACGATCTCAGGTAGCTGAAAATAGGTGTTGGAGCTGTGGTCTCTCGTGTCAATCAAACCAGGATTTACAGAACCATTTACACAAAACACTCGATCTCAATGACATAAAGTCTCTTTGGAATGATGATAAATATCTAAAACCCTTCAGGCAAGATGATCCCCTTCTGTACAGTTTTGCAGAAGACGAAGAGGATGATGACATTTCACTTATCAACAATAATCATCAGAGGAATACAGATACAGACGGAGGTATTTGCAATGTTGATGAAATGACTGGGGAAAGTCTTCCATCTCATCCTAACCGAAACAAAGAAAATGGAATGGAAGATTGTAGCTCTACTTCAAATGGTCATTTGAATGCTCCAAGCAACTTAGAGGCCGTGATTGAGAATACTGTGAAAACCACAGAGACTTTGGGATTGAATGATAAGATGCCGGAAGACGATCAATTAAAAATAGCCAGACAAATTTTTTATTCAAAGGAAGTCAAGAATGCAAATGAAAACTACTTTGGTTCGTATAGCTCTTTTGGCATACACAGAGAGATGTTAAGCGACAAGGTCAGAACGGAAGCTTATATGCAAGCTATTTTGCAAAACCCATCTCTCTTCCACAATGCAGCTGTGATGGATGTAGGTTGTGGAACAGGCATCCTTAGTCTCTTTTCTGCAAAAGCGGGTGCATCACGAGTTATTGCGGTTGAAGCGAGTGAAAAGATGGCAGCAGTGGCCACCCAAATTGCAAAAGACAATGGCCTCTTGCAGAATAGGAAACAGACTGGAGATTGTGGCATGTCAAGTGGGACTATAGAAGTGGTTCATGGTATGGTAGAAGAACTTGATAAGAACATAGAGATTCAGCCTCACAGTGTTGACGTATTATTGAGTGAATGGATGGGCTATTGCTTGCTGTATGAGTCAATGCTCAGCTCAGTTCTCTTTGCAAGGGATCGTTGGTTGAAGCCCGGCGGTGCAATCTTACCAGATACTGCCACAATTCTTGTTGCAGGATTTGGAGTTGGTGGAACTAGTCTTCCATTTTGGGAAAATGTGTATGGTTTCAGCATGTCTTGTGTTGGGAAGGAACTTGTAAAGGAGGCTGCCAAAGGTCCCATCGTTGACATTGTGGATCCTAAAGATTTAGTAACCAGTGCTGCAATTCTTCATACTTTTGATCTAGCAACTATGCATCCAGACGAAGTAGACTTTACTGCAAGTACCGACTTGGAACCAAATTTACCTTCAAGCAACTCAGAAAATGTTGAAGTTGAAACATCTTGGTGTCATGGAGTTGTCTTATGGTTTGAAACTGGTTTCACAAGCAGATTTTGCAAGGAATCATCGGCTGTTCTGTCTACATCCCCATACACTCCCAAAACTCACTGGTCTCAAACCATATTAACCTTCAAAGAACCAATTGCTATAACATCTAGAAAAGCTGCCGCCAACAAATCAGCACCAGTAGGTACCGTCGCTTCCCCAGCTGTCAAAGTTCATTTGCGCCTTAGCATTGTCCGTGCACCCGAACATCGAAGCATTGACATTTCACTGGAGACTACTGGGATTGCTGGTGATGGTAGGAAGCACCACTGGCCCGTACAACTTTTCACTCTAAGATAG 1935 42.22 MDQFPKELDKEFFNTEKFEREEEEEDDDDDEQEEDGQDDWDDWNADEEEGEEAFESNFQCLFCNSKYNDCDTLFNHCNSVHYFDFHGIRRALGLDFYGSFKIINYIRSQVAENRCWSCGLSCQSNQDLQNHLHKTLDLNDIKSLWNDDKYLKPFRQDDPLLYSFAEDEEDDDISLINNNHQRNTDTDGGICNVDEMTGESLPSHPNRNKENGMEDCSSTSNGHLNAPSNLEAVIENTVKTTETLGLNDKMPEDDQLKIARQIFYSKEVKNANENYFGSYSSFGIHREMLSDKVRTEAYMQAILQNPSLFHNAAVMDVGCGTGILSLFSAKAGASRVIAVEASEKMAAVATQIAKDNGLLQNRKQTGDCGMSSGTIEVVHGMVEELDKNIEIQPHSVDVLLSEWMGYCLLYESMLSSVLFARDRWLKPGGAILPDTATILVAGFGVGGTSLPFWENVYGFSMSCVGKELVKEAAKGPIVDIVDPKDLVTSAAILHTFDLATMHPDEVDFTASTDLEPNLPSSNSENVEVETSWCHGVVLWFETGFTSRFCKESSAVLSTSPYTPKTHWSQTILTFKEPIAITSRKAAANKSAPVGTVASPAVKVHLRLSIVRAPEHRSIDISLETTGIAGDGRKHHWPVQLFTLR 644
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 74077798 74082355 + Hsped.01g09590.1 Hepe01g0959 560069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0959 644 FunFam Protein arginine N-methyltransferase 6 268 433 - -
Hepe01g0959 644 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 272 623 IPR025799 GO:0016274(InterPro)|GO:0018216(InterPro)
Hepe01g0959 644 Pfam Methyltransferase domain 314 429 IPR041698 -
Hepe01g0959 644 Gene3D - 436 636 - -
Hepe01g0959 644 SUPERFAMILY beta-beta-alpha zinc fingers 35 171 IPR036236 -
Hepe01g0959 644 MobiDBLite consensus disorder prediction 1 43 - -
Hepe01g0959 644 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 249 625 IPR025799 GO:0005634(PANTHER)|GO:0016274(InterPro)|GO:0018216(InterPro)
Hepe01g0959 644 Pfam C2H2 type zinc-finger (2 copies) 59 134 IPR041661 -
Hepe01g0959 644 CDD AdoMet_MTases 314 432 - -
Hepe01g0959 644 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 278 581 IPR029063 -
Hepe01g0959 644 Pfam Arginine methyltransferase oligomerization subdomain 435 582 - -
Hepe01g0959 644 MobiDBLite consensus disorder prediction 1 17 - -
Hepe01g0959 644 MobiDBLite consensus disorder prediction 199 226 - -
Hepe01g0959 644 Gene3D Vaccinia Virus protein VP39 263 433 IPR029063 -
Hepe01g0959 644 MobiDBLite consensus disorder prediction 18 43 - -
Hepe01g0959 644 ProSitePatterns Zinc finger C2H2 type domain signature. 60 81 IPR013087 -
Hepe01g0959 644 MobiDBLite consensus disorder prediction 198 226 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0959 Hepe-Chr1:74077798 Hepe09g0851 Hepe-Chr9:8433370 1.23e-64 dispersed
Hepe01g0959 Hepe-Chr1:74077798 Hepe01g0962 Hepe-Chr1:74111026 4.90e-212 proximal
Hepe01g0959 Hepe-Chr1:74077798 Hepe01g0963 Hepe-Chr1:74113531 1.90e-208 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0959 K11436 - csv:101215999 963.755