Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0968 ATGGCTGATGTCAGTCCAAGGACTGATATCTCTACAGATGTCGACACAGATGACAAAAACCAGAGGCTCGATATGGTTCAGCGGAATGCTCTGGTGGCTTCTGATTCCAGTGATAGAACAAAAGATAAGTCTGATCAGAAGTCTCTACGTAGGCTTGCACAGAATCGTGAAGCTGCCAGAAAAAGTCGATTGCGGAAAAAAGCATATGTCCAACAGCTGGAGAGTAGTCGTTTAAAGTTGACCCAACTAGAGCAGGAGCTTCAGCGAGCACGGCAGCAGGGAATCTTCATATCAAGCTCAGGAGATCAGGCCCATTCGATGGCTGGAAATGGGGCCATGGCATTTGATGTGGAATATGCCCGTTGGTTGGAAGAACAAAACAAGCAGATCAATGAACTGAGAGCAGCAGTAAACTCTCATGCAAGTGATACTGAACTTCGAATGATTCTCGATGGCGTCTTGGCTCATTATGATGAGGTTTTCCGGCTAAAAGGCGTTGCTGCAAAGGCTGATGTTTTCCATTTATTGTCTGGCATGTGGAAAACACCTGCTGAAAGATGTTTTTTGTGGCTTGGTGGTTTCCGTTCATCAGAGCTCCTCAAGCTTCTTGTCAGTCAATTAGAGCCCCTCACCGAACAGCAGTTGATGGGCATATCGAACTTGCAGCAGTCCTCACAACAGACTGAAGATGCATTGTCACAAGGCATGGAAGCGTTGCATCAATCGTTGGCTGAGACGTTGTCCAGTGGATCTCTTGGCTCCTCGAATACGTCTGGCAATGTGGCAAACTACATGGGTCAAATGGCCACAGCCATGGGTAAACTTGGGACCCTTGAGGGGTTTATTCGCCAGGCTGACAATCTACGACAACAAACACTACAACAAATGCATAGGATATTGACAACTCGTCAGTCAGCTCGTGCACTTCTTGCAATTCATGATTACTTCTCCAGACTAAGAGCCCTTAGTTCCCTGTGGCTTGCTCGCCCTAAAGAGTGA 999 47.05 MADVSPRTDISTDVDTDDKNQRLDMVQRNALVASDSSDRTKDKSDQKSLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSMAGNGAMAFDVEYARWLEEQNKQINELRAAVNSHASDTELRMILDGVLAHYDEVFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVSQLEPLTEQQLMGISNLQQSSQQTEDALSQGMEALHQSLAETLSSGSLGSSNTSGNVANYMGQMATAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPKE 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 74181920 74188011 - Hsped.01g09680.1 Hepe01g0968 560078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0968 332 Gene3D - 46 98 - -
Hepe01g0968 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 45 89 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe01g0968 332 Coils Coil 123 143 - -
Hepe01g0968 332 ProSiteProfiles DOG1 domain profile. 112 329 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Hepe01g0968 332 MobiDBLite consensus disorder prediction 1 66 - -
Hepe01g0968 332 MobiDBLite consensus disorder prediction 35 59 - -
Hepe01g0968 332 Pfam Seed dormancy control 129 205 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Hepe01g0968 332 SMART brlzneu 43 106 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe01g0968 332 Coils Coil 66 93 - -
Hepe01g0968 332 MobiDBLite consensus disorder prediction 10 24 - -
Hepe01g0968 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 50 65 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe01g0968 332 PANTHER TRANSCRIPTION FACTOR TGA9 24 332 - -
Hepe01g0968 332 FunFam BZIP family transcription factor 46 95 - -
Hepe01g0968 332 SUPERFAMILY Leucine zipper domain 47 90 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe01g0968 332 Pfam bZIP transcription factor 47 87 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0968 Hepe-Chr1:74181920 Hepe10g0543 Hepe-Chr10:6451084 1.86e-172 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54794 PF14144 DOG1 1.20E-32 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0968 K14431 - csv:101216885 582.408