Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0968 ATGGCTGATGTCAGTCCAAGGACTGATATCTCTACAGATGTCGACACAGATGACAAAAACCAGAGGCTCGATATGGTTCAGCGGAATGCTCTGGTGGCTTCTGATTCCAGTGATAGAACAAAAGATAAGTCTGATCAGAAGTCTCTACGTAGGCTTGCACAGAATCGTGAAGCTGCCAGAAAAAGTCGATTGCGGAAAAAAGCATATGTCCAACAGCTGGAGAGTAGTCGTTTAAAGTTGACCCAACTAGAGCAGGAGCTTCAGCGAGCACGGCAGCAGGGAATCTTCATATCAAGCTCAGGAGATCAGGCCCATTCGATGGCTGGAAATGGGGCCATGGCATTTGATGTGGAATATGCCCGTTGGTTGGAAGAACAAAACAAGCAGATCAATGAACTGAGAGCAGCAGTAAACTCTCATGCAAGTGATACTGAACTTCGAATGATTCTCGATGGCGTCTTGGCTCATTATGATGAGGTTTTCCGGCTAAAAGGCGTTGCTGCAAAGGCTGATGTTTTCCATTTATTGTCTGGCATGTGGAAAACACCTGCTGAAAGATGTTTTTTGTGGCTTGGTGGTTTCCGTTCATCAGAGCTCCTCAAGCTTCTTGTCAGTCAATTAGAGCCCCTCACCGAACAGCAGTTGATGGGCATATCGAACTTGCAGCAGTCCTCACAACAGACTGAAGATGCATTGTCACAAGGCATGGAAGCGTTGCATCAATCGTTGGCTGAGACGTTGTCCAGTGGATCTCTTGGCTCCTCGAATACGTCTGGCAATGTGGCAAACTACATGGGTCAAATGGCCACAGCCATGGGTAAACTTGGGACCCTTGAGGGGTTTATTCGCCAGGCTGACAATCTACGACAACAAACACTACAACAAATGCATAGGATATTGACAACTCGTCAGTCAGCTCGTGCACTTCTTGCAATTCATGATTACTTCTCCAGACTAAGAGCCCTTAGTTCCCTGTGGCTTGCTCGCCCTAAAGAGTGA 999 47.05 MADVSPRTDISTDVDTDDKNQRLDMVQRNALVASDSSDRTKDKSDQKSLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQAHSMAGNGAMAFDVEYARWLEEQNKQINELRAAVNSHASDTELRMILDGVLAHYDEVFRLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVSQLEPLTEQQLMGISNLQQSSQQTEDALSQGMEALHQSLAETLSSGSLGSSNTSGNVANYMGQMATAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPKE 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 74181920 74188011 - Hsped.01g09680.1 Hepe01g0968 560078

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0968 332 Gene3D - 46 98 - -
Hepe01g0968 332 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 45 89 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe01g0968 332 Coils Coil 123 143 - -
Hepe01g0968 332 ProSiteProfiles DOG1 domain profile. 112 329 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Hepe01g0968 332 MobiDBLite consensus disorder prediction 1 66 - -
Hepe01g0968 332 MobiDBLite consensus disorder prediction 35 59 - -
Hepe01g0968 332 Pfam Seed dormancy control 129 205 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Hepe01g0968 332 SMART brlzneu 43 106 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe01g0968 332 Coils Coil 66 93 - -
Hepe01g0968 332 MobiDBLite consensus disorder prediction 10 24 - -
Hepe01g0968 332 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 50 65 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe01g0968 332 PANTHER TRANSCRIPTION FACTOR TGA9 24 332 - -
Hepe01g0968 332 FunFam BZIP family transcription factor 46 95 - -
Hepe01g0968 332 SUPERFAMILY Leucine zipper domain 47 90 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe01g0968 332 Pfam bZIP transcription factor 47 87 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0968 K14431 - - csv:101216885 582.408
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0968 Hepe-Chr1:74181920 Hepe10g0543 Hepe-Chr10:6451084 1.86e-172 dispersed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Hepe06g0987 . 1 340 bZIP Transcription Factor Family AT2G35530 65.5 5.7e-102 368.2
Hepe05g0642 . 22 783 bZIP Transcription Factor Family AT2G40950 50.6 2.1e-168 589.7
Hepe01g0646 . 9 335 bZIP Transcription Factor Family AT2G40620 57.0 1.5e-85 313.5
Hepe10g1387 . 1 326 bZIP Transcription Factor Family AT2G40620 51.2 9.4e-72 267.7
Hepe02g0459 . 380 504 bZIP Transcription Factor Family AT2G40620 70.4 4.0e-38 156.0
Hepe02g0460 . 384 520 bZIP Transcription Factor Family AT2G40620 65.7 4.4e-37 152.5
Hepe08g0294 . 1 232 bZIP Transcription Factor Family AT4G35040 63.8 1.5e-68 256.5
Hepe02g0426 . 1 265 bZIP Transcription Factor Family AT4G35040 55.6 2.7e-57 219.2
Hepe10g0543 . 6 332 bZIP Transcription Factor Family AT5G06950 79.5 7.5e-137 483.8
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT5G06950 76.4 4.7e-131 464.5
Hepe02g2705 . 222 555 bZIP Transcription Factor Family AT5G06950 69.1 9.5e-116 413.7
Hepe05g0675 . 137 472 bZIP Transcription Factor Family AT5G06950 66.7 3.1e-106 382.1
Hepe05g0553 . 214 507 bZIP Transcription Factor Family AT5G06950 60.5 2.1e-91 332.8
Hepe07g1296 . 60 343 bZIP Transcription Factor Family AT5G06950 57.2 1.5e-84 310.1
Hepe08g0225 . 207 482 bZIP Transcription Factor Family AT5G06950 56.9 3.7e-83 305.4
Hepe07g0658 . 79 360 bZIP Transcription Factor Family AT5G06950 55.4 4.8e-75 278.5
Hepe07g1296 . 48 371 bZIP Transcription Factor Family AT1G08320 72.5 1.3e-129 459.9
Hepe08g0225 . 201 482 bZIP Transcription Factor Family AT1G08320 70.9 1.0e-110 397.1
Hepe10g0543 . 45 332 bZIP Transcription Factor Family AT1G08320 63.5 1.5e-98 356.7
Hepe05g0553 . 191 507 bZIP Transcription Factor Family AT1G08320 58.7 7.7e-95 344.4
Hepe01g0968 . 45 332 bZIP Transcription Factor Family AT1G08320 60.8 1.6e-92 336.7
Hepe02g2705 . 263 555 bZIP Transcription Factor Family AT1G08320 58.7 8.2e-89 324.3
Hepe05g0675 . 171 472 bZIP Transcription Factor Family AT1G08320 53.6 4.8e-81 298.5
Hepe08g0294 . 1 260 bZIP Transcription Factor Family AT2G16770 62.5 1.4e-71 266.5
Hepe02g0426 . 1 265 bZIP Transcription Factor Family AT2G16770 56.8 2.3e-61 232.6
Hepe10g0543 . 25 332 bZIP Transcription Factor Family AT5G06960 79.9 6.6e-127 450.7
Hepe01g0968 . 33 332 bZIP Transcription Factor Family AT5G06960 77.3 2.3e-119 425.6
Hepe02g2705 . 248 555 bZIP Transcription Factor Family AT5G06960 67.9 2.7e-104 375.6
Hepe05g0675 . 158 472 bZIP Transcription Factor Family AT5G06960 64.6 7.9e-96 347.4
Hepe05g0553 . 200 507 bZIP Transcription Factor Family AT5G06960 60.1 2.9e-90 328.9
Hepe07g1296 . 55 343 bZIP Transcription Factor Family AT5G06960 56.7 1.0e-82 303.9
Hepe08g0225 . 203 482 bZIP Transcription Factor Family AT5G06960 54.8 1.2e-80 297.0
Hepe07g0658 . 54 360 bZIP Transcription Factor Family AT5G06960 51.9 1.2e-72 270.4
Hepe02g0460 . 1 515 bZIP Transcription Factor Family AT4G38900 59.4 3.2e-132 469.2
Hepe02g0459 . 1 502 bZIP Transcription Factor Family AT4G38900 59.6 4.3e-129 458.8
Hepe02g2790 . 110 278 bZIP Transcription Factor Family AT4G38900 58.4 3.5e-38 156.8
Hepe10g1972 . 96 276 bZIP Transcription Factor Family AT4G38900 53.4 1.1e-36 151.8
Hepe10g1387 . 127 243 bZIP Transcription Factor Family AT4G38900 74.4 3.3e-36 150.2
Hepe02g0460 . 2 520 bZIP Transcription Factor Family AT2G21230 51.6 4.8e-98 355.5
Hepe02g0459 . 2 525 bZIP Transcription Factor Family AT2G21230 51.0 1.0e-95 347.8
Hepe10g1972 . 96 276 bZIP Transcription Factor Family AT2G21230 55.4 1.1e-36 151.8
Hepe02g0250 . 1 257 bZIP Transcription Factor Family AT2G42380 57.4 1.6e-57 219.9
Hepe08g1288 . 27 363 bZIP Transcription Factor Family AT1G45249 51.9 3.7e-77 285.8
Hepe10g0543 . 9 332 bZIP Transcription Factor Family AT3G12250 80.2 8.8e-138 486.9
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT3G12250 75.9 2.6e-129 458.8
Hepe02g2705 . 222 555 bZIP Transcription Factor Family AT3G12250 68.3 1.4e-114 409.8
Hepe05g0675 . 137 472 bZIP Transcription Factor Family AT3G12250 67.8 6.2e-107 384.4
Hepe05g0553 . 214 507 bZIP Transcription Factor Family AT3G12250 59.5 1.2e-89 327.0
Hepe07g1296 . 60 343 bZIP Transcription Factor Family AT3G12250 57.2 1.6e-83 306.6
Hepe08g0225 . 207 482 bZIP Transcription Factor Family AT3G12250 56.9 6.2e-83 304.7
Hepe07g0658 . 48 360 bZIP Transcription Factor Family AT3G12250 52.8 3.7e-75 278.9
Hepe02g2705 . 104 555 bZIP Transcription Factor Family AT1G68640 62.1 1.7e-139 493.0
Hepe10g0543 . 9 332 bZIP Transcription Factor Family AT1G68640 68.2 2.2e-115 412.9
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT1G68640 64.5 8.2e-110 394.4
Hepe05g0675 . 135 472 bZIP Transcription Factor Family AT1G68640 59.5 1.8e-96 350.1
Hepe05g0553 . 202 507 bZIP Transcription Factor Family AT1G68640 55.5 6.3e-86 315.1
Hepe07g1296 . 65 343 bZIP Transcription Factor Family AT1G68640 56.4 2.2e-83 306.6
Hepe08g0225 . 205 482 bZIP Transcription Factor Family AT1G68640 54.2 6.3e-78 288.5
Hepe10g1972 . 14 289 bZIP Transcription Factor Family AT1G43700 52.5 2.6e-60 229.6
Hepe02g2790 . 12 316 bZIP Transcription Factor Family AT1G43700 52.6 5.9e-60 228.4
Hepe10g1387 . 32 202 bZIP Transcription Factor Family AT1G06850 53.0 8.1e-37 151.0
Hepe10g0263 . 1 148 bZIP Transcription Factor Family AT5G11260 64.4 1.1e-36 150.2
Hepe05g1302 . 51 370 bZIP Transcription Factor Family AT2G31370 71.3 6.1e-109 391.3
Hepe05g1299 . 37 351 bZIP Transcription Factor Family AT2G31370 68.6 9.1e-105 377.5
Hepe01g0646 . 25 242 bZIP Transcription Factor Family AT2G31370 51.0 1.5e-46 184.1
Hepe02g2790 . 142 299 bZIP Transcription Factor Family AT2G31370 61.6 1.6e-40 164.1
Hepe02g2851 . 17 322 bZIP Transcription Factor Family AT3G56850 58.2 6.6e-76 281.2
Hepe06g0987 . 33 342 bZIP Transcription Factor Family AT1G32150 67.1 3.1e-97 352.4
Hepe05g1302 . 12 364 bZIP Transcription Factor Family AT1G06070 68.5 1.6e-120 429.9
Hepe05g1299 . 1 350 bZIP Transcription Factor Family AT1G06070 67.3 4.2e-116 415.2
Hepe02g2790 . 142 317 bZIP Transcription Factor Family AT1G06070 59.6 3.6e-43 172.9
Hepe02g0460 . 384 534 bZIP Transcription Factor Family AT1G06070 61.4 4.6e-38 156.0
Hepe02g0459 . 368 512 bZIP Transcription Factor Family AT1G06070 63.9 6.0e-38 155.6
Hepe08g1288 . 27 363 bZIP Transcription Factor Family AT1G45249 51.9 3.7e-77 285.8
Hepe06g0987 . 1 340 bZIP Transcription Factor Family AT2G35530 65.5 5.7e-102 368.2
Hepe05g0642 . 22 783 bZIP Transcription Factor Family AT2G40950 50.6 2.1e-168 589.7
Hepe01g0646 . 9 335 bZIP Transcription Factor Family AT2G40620 57.0 1.5e-85 313.5
Hepe10g1387 . 1 326 bZIP Transcription Factor Family AT2G40620 51.2 9.4e-72 267.7
Hepe02g0459 . 380 504 bZIP Transcription Factor Family AT2G40620 70.4 4.0e-38 156.0
Hepe02g0460 . 384 520 bZIP Transcription Factor Family AT2G40620 65.7 4.4e-37 152.5
Hepe08g0294 . 1 232 bZIP Transcription Factor Family AT4G35040 63.8 1.5e-68 256.5
Hepe02g0426 . 1 265 bZIP Transcription Factor Family AT4G35040 55.6 2.7e-57 219.2
Hepe10g0543 . 6 332 bZIP Transcription Factor Family AT5G06950 79.5 7.5e-137 483.8
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT5G06950 76.4 4.7e-131 464.5
Hepe02g2705 . 222 555 bZIP Transcription Factor Family AT5G06950 69.1 9.5e-116 413.7
Hepe05g0675 . 137 472 bZIP Transcription Factor Family AT5G06950 66.7 3.1e-106 382.1
Hepe05g0553 . 214 507 bZIP Transcription Factor Family AT5G06950 60.5 2.1e-91 332.8
Hepe07g1296 . 60 343 bZIP Transcription Factor Family AT5G06950 57.2 1.5e-84 310.1
Hepe08g0225 . 207 482 bZIP Transcription Factor Family AT5G06950 56.9 3.7e-83 305.4
Hepe07g0658 . 79 360 bZIP Transcription Factor Family AT5G06950 55.4 4.8e-75 278.5
Hepe07g1296 . 48 371 bZIP Transcription Factor Family AT1G08320 72.5 1.3e-129 459.9
Hepe08g0225 . 201 482 bZIP Transcription Factor Family AT1G08320 70.9 1.0e-110 397.1
Hepe10g0543 . 45 332 bZIP Transcription Factor Family AT1G08320 63.5 1.5e-98 356.7
Hepe05g0553 . 191 507 bZIP Transcription Factor Family AT1G08320 58.7 7.7e-95 344.4
Hepe01g0968 . 45 332 bZIP Transcription Factor Family AT1G08320 60.8 1.6e-92 336.7
Hepe02g2705 . 263 555 bZIP Transcription Factor Family AT1G08320 58.7 8.2e-89 324.3
Hepe05g0675 . 171 472 bZIP Transcription Factor Family AT1G08320 53.6 4.8e-81 298.5
Hepe08g0294 . 1 260 bZIP Transcription Factor Family AT2G16770 62.5 1.4e-71 266.5
Hepe02g0426 . 1 265 bZIP Transcription Factor Family AT2G16770 56.8 2.3e-61 232.6
Hepe10g0543 . 25 332 bZIP Transcription Factor Family AT5G06960 79.9 6.6e-127 450.7
Hepe01g0968 . 33 332 bZIP Transcription Factor Family AT5G06960 77.3 2.3e-119 425.6
Hepe02g2705 . 248 555 bZIP Transcription Factor Family AT5G06960 67.9 2.7e-104 375.6
Hepe05g0675 . 158 472 bZIP Transcription Factor Family AT5G06960 64.6 7.9e-96 347.4
Hepe05g0553 . 200 507 bZIP Transcription Factor Family AT5G06960 60.1 2.9e-90 328.9
Hepe07g1296 . 55 343 bZIP Transcription Factor Family AT5G06960 56.7 1.0e-82 303.9
Hepe08g0225 . 203 482 bZIP Transcription Factor Family AT5G06960 54.8 1.2e-80 297.0
Hepe07g0658 . 54 360 bZIP Transcription Factor Family AT5G06960 51.9 1.2e-72 270.4
Hepe02g0460 . 1 515 bZIP Transcription Factor Family AT4G38900 59.4 3.2e-132 469.2
Hepe02g0459 . 1 502 bZIP Transcription Factor Family AT4G38900 59.6 4.3e-129 458.8
Hepe02g2790 . 110 278 bZIP Transcription Factor Family AT4G38900 58.4 3.5e-38 156.8
Hepe10g1972 . 96 276 bZIP Transcription Factor Family AT4G38900 53.4 1.1e-36 151.8
Hepe10g1387 . 127 243 bZIP Transcription Factor Family AT4G38900 74.4 3.3e-36 150.2
Hepe02g0460 . 2 520 bZIP Transcription Factor Family AT2G21230 51.6 4.8e-98 355.5
Hepe02g0459 . 2 525 bZIP Transcription Factor Family AT2G21230 51.0 1.0e-95 347.8
Hepe10g1972 . 96 276 bZIP Transcription Factor Family AT2G21230 55.4 1.1e-36 151.8
Hepe02g0250 . 1 257 bZIP Transcription Factor Family AT2G42380 57.4 1.6e-57 219.9
Hepe10g0543 . 9 332 bZIP Transcription Factor Family AT3G12250 80.2 8.8e-138 486.9
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT3G12250 75.9 2.6e-129 458.8
Hepe02g2705 . 222 555 bZIP Transcription Factor Family AT3G12250 68.3 1.4e-114 409.8
Hepe05g0675 . 137 472 bZIP Transcription Factor Family AT3G12250 67.8 6.2e-107 384.4
Hepe05g0553 . 214 507 bZIP Transcription Factor Family AT3G12250 59.5 1.2e-89 327.0
Hepe07g1296 . 60 343 bZIP Transcription Factor Family AT3G12250 57.2 1.6e-83 306.6
Hepe08g0225 . 207 482 bZIP Transcription Factor Family AT3G12250 56.9 6.2e-83 304.7
Hepe07g0658 . 48 360 bZIP Transcription Factor Family AT3G12250 52.8 3.7e-75 278.9
Hepe02g2705 . 104 555 bZIP Transcription Factor Family AT1G68640 62.1 1.7e-139 493.0
Hepe10g0543 . 9 332 bZIP Transcription Factor Family AT1G68640 68.2 2.2e-115 412.9
Hepe01g0968 . 1 332 bZIP Transcription Factor Family AT1G68640 64.5 8.2e-110 394.4
Hepe05g0675 . 135 472 bZIP Transcription Factor Family AT1G68640 59.5 1.8e-96 350.1
Hepe05g0553 . 202 507 bZIP Transcription Factor Family AT1G68640 55.5 6.3e-86 315.1
Hepe07g1296 . 65 343 bZIP Transcription Factor Family AT1G68640 56.4 2.2e-83 306.6
Hepe08g0225 . 205 482 bZIP Transcription Factor Family AT1G68640 54.2 6.3e-78 288.5
Hepe10g1972 . 14 289 bZIP Transcription Factor Family AT1G43700 52.5 2.6e-60 229.6
Hepe02g2790 . 12 316 bZIP Transcription Factor Family AT1G43700 52.6 5.9e-60 228.4
Hepe10g1387 . 32 202 bZIP Transcription Factor Family AT1G06850 53.0 8.1e-37 151.0
Hepe10g0263 . 1 148 bZIP Transcription Factor Family AT5G11260 64.4 1.1e-36 150.2
Hepe05g1302 . 51 370 bZIP Transcription Factor Family AT2G31370 71.3 6.1e-109 391.3
Hepe05g1299 . 37 351 bZIP Transcription Factor Family AT2G31370 68.6 9.1e-105 377.5
Hepe01g0646 . 25 242 bZIP Transcription Factor Family AT2G31370 51.0 1.5e-46 184.1
Hepe02g2790 . 142 299 bZIP Transcription Factor Family AT2G31370 61.6 1.6e-40 164.1
Hepe02g2851 . 17 322 bZIP Transcription Factor Family AT3G56850 58.2 6.6e-76 281.2
Hepe06g0987 . 33 342 bZIP Transcription Factor Family AT1G32150 67.1 3.1e-97 352.4
Hepe05g1302 . 12 364 bZIP Transcription Factor Family AT1G06070 68.5 1.6e-120 429.9
Hepe05g1299 . 1 350 bZIP Transcription Factor Family AT1G06070 67.3 4.2e-116 415.2
Hepe02g2790 . 142 317 bZIP Transcription Factor Family AT1G06070 59.6 3.6e-43 172.9
Hepe02g0460 . 384 534 bZIP Transcription Factor Family AT1G06070 61.4 4.6e-38 156.0
Hepe02g0459 . 368 512 bZIP Transcription Factor Family AT1G06070 63.9 6.0e-38 155.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000424 3 12 2 4 3 3 5 3 3 3 3 2 7 3 3 5 3 4 3 3 3 3 3 3 3 2 3 9 14 2 122
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54794 PF14144 DOG1 1.20E-32 No_clan Hepe TF