Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g0986 ATGAATCCCATGGCTCTTGTTTCTGCTGAGGCTCAATTTCATGTGTTGGCTGTTGATGACAGCCTTGTTGATAGGAAACTGATTGAAAGGCTGCTCAAAACCTCCTCCTTCAATGTTACTGCTGTGGATTCTGGAAGCAAAGCTTTGGAGCTTCTGGGTAATTTGGTTAGAGGGAGAAATGGAAGCACTCCTTCTCCAGTTTCCCCTGAAAATCATCATCAGGATATTGAAGTTAATCTCATCATTACAGATTACTGTATGCCTGAAATGACAGGCTATGATCTTCTCAGAAAGATCAAGGGATCCGACTCACTTAAAGACATTCCTGTTGTGATTATGTCCTCTGAGAATGTTCCATCAAGAATCAACAGATGTTTGGAAGAAGGAGCTGAGGAGTTTTTGCTAAAACCAGTGAAATTATCTGATGTCAATAAGCTTAAGCCTTTCATATGTAGAGGAAAAGCCAAGGAAATGGATTTCAACAATCTCAAGAGAAAGGAAATGGAACAGAGCCTATCATCTGAGAGAACAAGAACAAAATACAATGATCATTCCTAA 558 39.78 MNPMALVSAEAQFHVLAVDDSLVDRKLIERLLKTSSFNVTAVDSGSKALELLGNLVRGRNGSTPSPVSPENHHQDIEVNLIITDYCMPEMTGYDLLRKIKGSDSLKDIPVVIMSSENVPSRINRCLEEGAEEFLLKPVKLSDVNKLKPFICRGKAKEMDFNNLKRKEMEQSLSSERTRTKYNDHS 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 74485700 74488089 + Hsped.01g09860.1 Hepe01g0986 560096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g0986 185 Gene3D - 14 182 - -
Hepe01g0986 185 MobiDBLite consensus disorder prediction 166 185 - -
Hepe01g0986 185 Pfam Response regulator receiver domain 73 143 IPR001789 GO:0000160(InterPro)
Hepe01g0986 185 SUPERFAMILY CheY-like 13 143 IPR011006 -
Hepe01g0986 185 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 174 IPR045279 GO:0009736(InterPro)
Hepe01g0986 185 SMART REC_2 13 147 IPR001789 GO:0000160(InterPro)
Hepe01g0986 185 CDD REC_typeA_ARR 15 146 - -
Hepe01g0986 185 ProSiteProfiles Response regulatory domain profile. 14 151 IPR001789 GO:0000160(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0986 Hepe-Chr1:74485700 Hepe02g2525 Hepe-Chr2:71971938 9.39e-67 dispersed
Hepe01g0986 Hepe-Chr1:74485700 Hepe05g0710 Hepe-Chr5:12677465 1.04e-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54798 PF00072 Response_reg 3.70E-20 CL0304 Hepe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g0986 K14492 - csv:101207245 270.396