Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe01g0990 | ATGAGTTTGGATTCATTTTCGCTAGACAAAATGTCGATGAAGTTGCACCATATTGATCTAAAGGGTGGTTCAGGTACCCAGAGAAGGCTGAAGGATCTCACGTCTCAGTCTGCCAATAAGTTCTGTGCAGATTGTGGATCTCCAGATCCAAAATGGGTAACTGTGAGTTTTGGGGCATTTATTTGCATCAAGTGCTCTGGAGTACACCGAAGCCTTGGAGTGCACATATCTAAGGTTCTTTCAGTGAAGTTAGATGATTGGACAGATGAACAAGTTGATGCATTGATGAGTTTAGGTGGAAATACTGCCGTAAACAAAAAGTATGAACTTTTCATCCCAGAAGGTAATAAAAAACCAAAACCAGATTCCTCTATAGAGGAGCGTTTGGATTTTATAAGGAAAAAATATGAGCTGCTGCAATTCTCAAGTTTTGATGACCAGTTCTTCTGTCCTTTTCCACCCCCGCAGAAGAAAAATCCAACATTCACGCATTGCAATTCTAGTGATCATGGAAACCCAGAAAGGAGGAATTATGAAAAAGTACCAACAAAAAATCGAATTGGAAGTGCATTCCGGAACAGCTGGGGAAGAAAAGATTCTGATAAGACCTGCAAAAAGGGAAATCTGGTATTAAGCAGCTCAATGGCAGGTATGATTGAATTCGTTGGTTTAATCAAGGTCAACGTGGTAAGAGGAACCAATTTAGCTATCAGGGATGTCGTGACGAGCGATCCGTATGTAATTCTCTCGTTGGGTAATCAATCAGTGAAGACACGTGTTATAAAAAGCAGTTTGAATCCAGTCTGGAATGAGAGCCTAATGTTGTCAATTCCAGATCACATTCCTCCATTAAGGGTGATTGTGTATGACAAAGATACATTTTCGACCGATGACTTCATGGGTGAAGCAGAAATTGATATCAATCCGCTGCTCACCGCGGCCCGAGCCTGTGAGAAGTCCACAGCCAGTGAACCAATGCAGCTAGGAAAATGGGTTGCAAGCAAGGAGAACACTCTTGCAAAGGATGGCATCATCACTCTTGTAGATGGGAAGATCCGGCAAGACATCTCTTTGAAGCTGCAGAACGTCGAGAGGGGTGTGCTCGAGATGGAGCTCGAATGTGTTCCTCTTTCTCAGTAG | 1140 | 42.72 | MSLDSFSLDKMSMKLHHIDLKGGSGTQRRLKDLTSQSANKFCADCGSPDPKWVTVSFGAFICIKCSGVHRSLGVHISKVLSVKLDDWTDEQVDALMSLGGNTAVNKKYELFIPEGNKKPKPDSSIEERLDFIRKKYELLQFSSFDDQFFCPFPPPQKKNPTFTHCNSSDHGNPERRNYEKVPTKNRIGSAFRNSWGRKDSDKTCKKGNLVLSSSMAGMIEFVGLIKVNVVRGTNLAIRDVVTSDPYVILSLGNQSVKTRVIKSSLNPVWNESLMLSIPDHIPPLRVIVYDKDTFSTDDFMGEAEIDINPLLTAARACEKSTASEPMQLGKWVASKENTLAKDGIITLVDGKIRQDISLKLQNVERGVLEMELECVPLSQ | 379 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 74520958 | 74528571 | - | Hsped.01g09900.1 | Hepe01g0990 | 560100 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe01g0990 | 379 | Gene3D | Arf GTPase activating protein | 11 | 148 | IPR038508 | - | |
Hepe01g0990 | 379 | PRINTS | HIV Rev interacting protein signature | 79 | 100 | IPR001164 | GO:0005096(InterPro) | |
Hepe01g0990 | 379 | PRINTS | HIV Rev interacting protein signature | 39 | 58 | IPR001164 | GO:0005096(InterPro) | |
Hepe01g0990 | 379 | PRINTS | HIV Rev interacting protein signature | 58 | 75 | IPR001164 | GO:0005096(InterPro) | |
Hepe01g0990 | 379 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 27 | 141 | IPR037278 | - | |
Hepe01g0990 | 379 | PANTHER | ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 | 23 | 379 | IPR044518 | GO:0005096(InterPro)|GO:0005543(InterPro) | |
Hepe01g0990 | 379 | SMART | C2_3c | 224 | 319 | IPR000008 | - | |
Hepe01g0990 | 379 | CDD | ArfGap | 30 | 136 | - | - | |
Hepe01g0990 | 379 | FunFam | stromal membrane-associated protein 1 isoform X1 | 14 | 147 | - | - | |
Hepe01g0990 | 379 | Gene3D | C2 domain | 222 | 377 | IPR035892 | - | |
Hepe01g0990 | 379 | CDD | C2_ArfGAP | 222 | 366 | - | - | |
Hepe01g0990 | 379 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 27 | 141 | IPR001164 | GO:0005096(InterPro) | |
Hepe01g0990 | 379 | Pfam | Putative GTPase activating protein for Arf | 28 | 141 | IPR001164 | GO:0005096(InterPro) | |
Hepe01g0990 | 379 | ProSiteProfiles | C2 domain profile. | 205 | 321 | IPR000008 | - | |
Hepe01g0990 | 379 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 222 | 315 | IPR035892 | - | |
Hepe01g0990 | 379 | SMART | arf_gap_3 | 27 | 149 | IPR001164 | GO:0005096(InterPro) | |
Hepe01g0990 | 379 | FunFam | ADP-ribosylation factor GTPase-activating protein AGD12 | 221 | 379 | - | - | |
Hepe01g0990 | 379 | Pfam | C2 domain | 224 | 312 | IPR000008 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g0990 | Hepe-Chr1:74520958 | Hepe02g2498 | Hepe-Chr2:71554621 | 7.21e-173 | dispersed | |
Hepe01g0990 | Hepe-Chr1:74520958 | Hepe04g2050 | Hepe-Chr4:75364914 | 3.38e-113 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe01g0990 | K12486 | - | csv:101221541 | 645.195 |