Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1053 ATGGTGGCCGGCGGAGGAATCTCCGGCTTCTCCGACATGAGGAGCATCGCCGTCCACGTCATCACGGGGCGGTGGTTCGTGGTGTTCGCTTCACTTCTAATCATGGCGGCCGCCGGAGCCACGTACATGTTCAGCTTGTATTCCAACGACATCAAGTCGGTTTTGGGTTACGACCAAACCACGTTGAATTTGTTGAGTTTTTTCAAGGATTTGGGTGCAAACGTCGGCGTTTTGGCTGGCCTTATTAATGAAGTTACGCCGCCGTGGGTGGTTCTCATCATCGGCGCCCTTCTTAATTTCTTTGGTTACTTTATGATTTGGCTCGCCGTTACTAAGAGGATCTCCAAGCCCCAAGTTTGGCAAATGTGTCTCTATATTTGTATTGGAGCTAATTCTCAATCCTTTGCTAATACCGGCTCGCTTGTTACTTGTGTCAAGAACTTTCCCGAGAGTCGCGGCGTCGTTCTCGGTATTTTAAAAGGCTACGTCGGCCTGAGCGGCGCCATAATCACTCAGCTCTTCCACGCCTTCTACGGCAACGACACCAAATCCCTAATCCTCCTCATCGGATGGCTGCCGGCGGCGATATCCTTCGCATTTCTCCGAACAATTCGAATCATGAAAGTAATCCGACAGCCCAACGAGCTCAAAGTCTTCTACAATTTCCTCTACATTTCTCTAGGCCTCGCCGGATTCCTAATGCTAATGATTATCGTAGAAAGCAAATTAACCTTCAACCAAAGCGAATTCGGCGGCAGCGCCGCCGTCGTCCTCCTCCTCCTCTTCCTCCCAATCGCCATCGTCATCGTCGAAGAATACAATCTCTGGAAACTCAAATCCGCCGCCATAAAAAACCCAAACCCAATTAATCAAATCATAACAGAAAAACCCAATTTCTCAAAAACAGAGCCTCCCAAAAAAACCCCAAATCAAAATCAACAACCGTCTTGCTGGAAAACAATCTTCAGCCCGCCGGAGCGCGGCGAGGATTTCACAATCCTCCAAGCTCTGTTCAGCGTCGACATGTTGATTCTATTCTTCTCTGCAATCTGCGGCGTCGGCGGAACTTTAACGGCGATAGACAATCTGGGTCAGATCGGAATTTCCTTGGGATATCCAAAAAGAAGCATCAGCACATTCGTTTCACTCGTCAGCATTTGGAATTACCTCGGCCGAGTTTCCGCCGGTTTCGTTTCAGAAATCGTTTTAACAAAATACAAATTCCCTCGTCCATTAATGCTAACTCTAACTCTCCTTTTCTCCTGCATTGGCCATTTGATCATCGCTTTCGATGTTCCGAACGGGCTTTACGCGGCGTCCATCGTCATCGGATTCTGCTTCGGCGCGCAGTGGCCGTTGATTTTCGCCATAATTTCGGAGCTTTTCGGGTTGAAATATTACTCTACGCTTTACAATTTCGGGGCGGTGGCGAGTCCGATTGGGCTATATGTTCTGAATGTGAAAGTAGCGGGGAATTTCTACGACACAGTGGCGGAGAAGCAGCTGATTGCAAGAGGGGTTCCGAGAAAAACAGGGGAGGAGCTGAAGTGCTTTGGTGTGGAGTGCTTTAAGAAATCGTTTATTGTGATTACGGGAGTTACTTTGTTGGGTATGGTTGTTTCGTTGATTTTAGTGATTAGAACCAGGAGTTTTTATAAAGGGGATATTTATAAGAGGTTTCGAGATGAAGCTGAAGCTGAAGCTGAAACAGAGTTGGCCGGAAACGGTGCGGTGGCGGTGGTGGCTGCCGGAGCGCCGGAGGAGACGAGAAATCGATAG 1779 48.4 MVAGGGISGFSDMRSIAVHVITGRWFVVFASLLIMAAAGATYMFSLYSNDIKSVLGYDQTTLNLLSFFKDLGANVGVLAGLINEVTPPWVVLIIGALLNFFGYFMIWLAVTKRISKPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLFHAFYGNDTKSLILLIGWLPAAISFAFLRTIRIMKVIRQPNELKVFYNFLYISLGLAGFLMLMIIVESKLTFNQSEFGGSAAVVLLLLFLPIAIVIVEEYNLWKLKSAAIKNPNPINQIITEKPNFSKTEPPKKTPNQNQQPSCWKTIFSPPERGEDFTILQALFSVDMLILFFSAICGVGGTLTAIDNLGQIGISLGYPKRSISTFVSLVSIWNYLGRVSAGFVSEIVLTKYKFPRPLMLTLTLLFSCIGHLIIAFDVPNGLYAASIVIGFCFGAQWPLIFAIISELFGLKYYSTLYNFGAVASPIGLYVLNVKVAGNFYDTVAEKQLIARGVPRKTGEELKCFGVECFKKSFIVITGVTLLGMVVSLILVIRTRSFYKGDIYKRFRDEAEAEAETELAGNGAVAVVAAGAPEETRNR 592
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 75235676 75238656 + Hsped.01g10530.1 Hepe01g1053 560163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1053 592 SUPERFAMILY MFS general substrate transporter 24 269 IPR036259 -
Hepe01g1053 592 Pfam Major Facilitator Superfamily 303 477 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Hepe01g1053 592 MobiDBLite consensus disorder prediction 295 315 - -
Hepe01g1053 592 CDD MFS_Mch1p_like 23 538 - -
Hepe01g1053 592 Pfam Nodulin-like 24 269 IPR010658 -
Hepe01g1053 592 Gene3D MFS general substrate transporter like domains 336 552 IPR036259 -
Hepe01g1053 592 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 23 561 - GO:0016020(PANTHER)
Hepe01g1053 592 SUPERFAMILY MFS general substrate transporter 252 550 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1053 Hepe-Chr1:75235676 Hepe10g1059 Hepe-Chr10:42266266 9.82e-240 dispersed
Hepe01g1053 Hepe-Chr1:75235676 Hepe01g1055 Hepe-Chr1:75251659 1.36e-123 proximal
Hepe01g1053 Hepe-Chr1:75235676 Hepe01g1054 Hepe-Chr1:75248108 5.79e-34 tandem
Hepe01g1053 Hepe-Chr1:75235676 Hepe02g2925 Hepe-Chr2:78315205 1.75e-270 wgd
Hepe01g1053 Hepe-Chr1:75235676 Hepe05g0285 Hepe-Chr5:3502717 1.40e-261 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1053 - - - 0.0