Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1069 ATGAATTGTCTTCAGAGCCTTTCAATATCATCCACTTTGCCGCTGCGAAGCTTCAAATGCCGACAGAGAAATCCCGAATTCCAGCTCTGCAAGCTGGCGATGAGGAACTTTACCGATCTACATCGACGTTCTTCCGTGAAGGCTGTATCTGGCTCTACATCGAGTGGCGCTGAAGTGGATGTTGCCGAGGAAAAGGATGAAAAATCTGAGATATATAGCCATAACATGACAGAAGCTATGGGTGCTGTATTGACATATAGACATGAGCTGGGAATAAATTACAACTACATTTGTCCAGATTTAATTGTAGGATCATGCCTACAGACTCCAGAGGATGTCGACAAGCTCCGCAGCATTGGAGTAAAAACAATTTTCTGCTTGCAGAAAGATTCAGATTTGGAATATTTTGGGGTTGACATTGGTGCTATAATGGCGTATGCAAAGACGTTTGATGATATTGAACATTTGCGAGCTCAAATAAGAGATTTTGATGTGTTCGACCTACGGCTAAGATTACCAGCTGTCGTAAGCAAATTACATAAAGCCATAAACCGAAATGGTGGAATGGCTTACATACATTGTACTGCTGGACTTGGAAGAGCTCCTGCTGTTGCGATGGCATATATGTTCTGGGTTCAAGGCTACAAACTCAATGAGGCCTTAGAATTACTGCTGAGAAAACGCTCATGCTTCCCAAAAATAGATGCTATTAAGAATGCGACGGCTGATATTCTTTTGGGATTTAAAAAGAAGCCTGTCACTTTATCATGGAAAGACGGCCACCGCTCAACTGTAGAAGTATCTGGACTTGATATTGGATGGGGCCAGAGGATTCCATTAAAATTCAACCAGGAACGAGGCGCATGGATTCTCAATAGGGAACTGGCGGAAGGACGATATGAATACAAGTATATTATTGATGGTGTATGGACGTGCAACAAAGACGAGTCCGTGACTCCACCCAACAAAGATGGCCACGTTAACAATTTCATTGAAGTTGTTGATGCTGAAGATCCAAGAAGTGAGAGAGCAATTCTTCGGCAAAGGATAACTGGAGATGACCCAGAGCTTACTACCGAAGAAAGAAGCAAAATAATACAATTTCTGGATGCTTGCCCAGATGAAAATTGA 1131 42.44 MNCLQSLSISSTLPLRSFKCRQRNPEFQLCKLAMRNFTDLHRRSSVKAVSGSTSSGAEVDVAEEKDEKSEIYSHNMTEAMGAVLTYRHELGINYNYICPDLIVGSCLQTPEDVDKLRSIGVKTIFCLQKDSDLEYFGVDIGAIMAYAKTFDDIEHLRAQIRDFDVFDLRLRLPAVVSKLHKAINRNGGMAYIHCTAGLGRAPAVAMAYMFWVQGYKLNEALELLLRKRSCFPKIDAIKNATADILLGFKKKPVTLSWKDGHRSTVEVSGLDIGWGQRIPLKFNQERGAWILNRELAEGRYEYKYIIDGVWTCNKDESVTPPNKDGHVNNFIEVVDAEDPRSERAILRQRITGDDPELTTEERSKIIQFLDACPDEN 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 75447376 75457355 - Hsped.01g10690.1 Hepe01g1069 560179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1069 376 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 86 263 - -
Hepe01g1069 376 CDD DSP_laforin-like 92 239 IPR045204 GO:0019203(InterPro)
Hepe01g1069 376 SMART dsp_5 93 239 IPR020422 GO:0006470(InterPro)
Hepe01g1069 376 CDD E_set_AMPKbeta_like_N 252 333 - -
Hepe01g1069 376 ProSiteProfiles Dual specificity protein phosphatase domain profile. 93 250 IPR020422 GO:0006470(InterPro)
Hepe01g1069 376 Pfam Dual specificity phosphatase, catalytic domain 149 231 IPR000340 GO:0016311(InterPro)
Hepe01g1069 376 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 90 234 IPR029021 -
Hepe01g1069 376 Gene3D Protein tyrosine phosphatase superfamily 86 368 IPR029021 -
Hepe01g1069 376 SUPERFAMILY E set domains 250 334 IPR014756 -
Hepe01g1069 376 Pfam Glycogen recognition site of AMP-activated protein kinase 252 335 IPR032640 -
Hepe01g1069 376 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 170 228 IPR000387 GO:0016311(InterPro)
Hepe01g1069 376 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 248 338 - -
Hepe01g1069 376 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 3 375 IPR052832 GO:0005983(PANTHER)|GO:0009507(PANTHER)|GO:0019203(PANTHER)|GO:0046838(PANTHER)|GO:2001070(PANTHER)
Hepe01g1069 376 Gene3D Immunoglobulins 248 340 IPR013783 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0659 Hepe-Chr1:68774563 Hepe01g1069 Hepe-Chr1:75447376 3.94e-43 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1069 - - - 0.0