Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1071 ATGTTGGCAATGGAGAAGGATTTTGATGCCAAGTTGATGATTCAGGGCAACGATTCTAATGGTGGCAATGTTCAGAGATCCAAGAGCTTTGCCTTTCGTGCTCCTCAGGAGAATTTTACAATTCAGGATTTTGAATTGGGAAAGATTTATGGCGTTGGTTCTTATTCGAAGGTTGTGAGGGCGAAGAAGAAGGACACAGGAACTGTATATGCATTGAAGATAATGGACAAAAAATTCATCACCAAAGAAAATAAAACTGCTTATGTGAAGTTGGAAAGAATTGTACTTGATCAGTTGGACCATCCTGGTGTTGTCAGACTATTTTTTACCTTTCAGGATTCTTTTTCTTTGTACATGGCATTGGAGTCCTGTGAAGGTGGAGAACTTTTTGATCAGATAACTAGGAAAGGTCGTCTTTCAGAGGATGAAGCTCGGTTTTATGCCGCAGAAGTGGTCGATGCTCTTGAATACATACACAACATGGGGTTGATACACCGAGATATCAAGCCTGAAAACTTGCTACTTACCACTGATGGACATATCAAAATAGCTGATTTTGGGAGTGTAAAGCCTATGGTGGATAGTCGAATTACCGTGCTTCCAAATGCAGCATCAGATGATAAAGCTTGTACATTTGTGGGCACTGCTGCATATGTTCCTCCAGAAGTCCTTAATTCCTCCCCTGCAACTTTCGGAAATGATCTCTGGGCGCTTGGATGCACCTTGTACCAGATGCTTTCAGGGACTTCTCCTTTTAAGGATGCAAGTGAGTGGCTTATTTTCCAAAAAATTGTAGCGAGAGATATAAAATTCCCCAGCTATTTTTCAGAGCAAGCCAAGGATCTCATCGACCACCTATTGGATTTAGATCCCAGCAAGAGACTGGGTGTCGGACCTGAGGGTTATGCTTCTCTCAAGACTCATCCCTTCTTTGAGGGGATGGATTGGAAGAACATAAGAGTACAAACCCCTCCCAGGCTTGCTTTAGAAGCAGTGCCTCATTCAAATGAGAACGATGATGGCTCCGAGTCCTCTTGGAATCCTTCACATGTCGGAGACGGTGCATCGAGACAAAATGATGGGAATGCTGGTTCTGCATCAACTTCTGATGGATCACATCATATTACTCGGCTTGCATCGATAGACTCCTTCGATTCAAAATGGCAACAATTCCTCGAACCTGGAGAATCTGTTCTTATGATCTCAATGGTGAAAAAAATTCAGAAGCTAACAAGCAAAAAGGTTCAGCTCATCCTCACCAACAAACCAAAGTTGATTTATGTTGATCCTTCAAAGCTCATTGTCAAGGGGAGTATTATTTGGTCTGACAATTCTAATGACCTCAACATTCAAGTCATCAGTCCTTCAAATTTCAAGATTTGCACACCAAAGAAGATAGCCACTTTCGAGGATGCAAAACAGCGAGCATGGCAGTGGAAGAAGGCGATCGAGGGGCTTCAGAATCGGTGA 1470 42.59 MLAMEKDFDAKLMIQGNDSNGGNVQRSKSFAFRAPQENFTIQDFELGKIYGVGSYSKVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGVVRLFFTFQDSFSLYMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHNMGLIHRDIKPENLLLTTDGHIKIADFGSVKPMVDSRITVLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQKIVARDIKFPSYFSEQAKDLIDHLLDLDPSKRLGVGPEGYASLKTHPFFEGMDWKNIRVQTPPRLALEAVPHSNENDDGSESSWNPSHVGDGASRQNDGNAGSASTSDGSHHITRLASIDSFDSKWQQFLEPGESVLMISMVKKIQKLTSKKVQLILTNKPKLIYVDPSKLIVKGSIIWSDNSNDLNIQVISPSNFKICTPKKIATFEDAKQRAWQWKKAIEGLQNR 489
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 75489427 75494088 + Hsped.01g10710.1 Hepe01g1071 560181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1071 489 MobiDBLite consensus disorder prediction 332 372 - -
Hepe01g1071 489 SUPERFAMILY PH domain-like 305 488 - -
Hepe01g1071 489 Gene3D - 357 489 IPR011993 -
Hepe01g1071 489 Pfam Protein kinase domain 45 311 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1071 489 FunFam 3-phosphoinositide-dependent protein kinase 2-like 128 326 - -
Hepe01g1071 489 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Hepe01g1071 489 FunFam 3-phosphoinositide-dependent protein kinase 1 359 489 - -
Hepe01g1071 489 SMART serkin_6 44 311 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1071 489 Pfam PH domain 386 488 IPR033931 -
Hepe01g1071 489 MobiDBLite consensus disorder prediction 338 372 - -
Hepe01g1071 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g1071 489 FunFam 3-phosphoinositide-dependent protein kinase 2-like 42 127 - -
Hepe01g1071 489 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 29 352 - GO:0004691(PANTHER)|GO:0005952(PANTHER)|GO:0007165(PANTHER)|GO:0018105(PANTHER)
Hepe01g1071 489 ProSiteProfiles Protein kinase domain profile. 44 311 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1071 489 CDD STKc_PDK1 42 311 IPR039046 GO:0004674(InterPro)
Hepe01g1071 489 Coils Coil 469 489 - -
Hepe01g1071 489 SUPERFAMILY Protein kinase-like (PK-like) 41 367 IPR011009 -
Hepe01g1071 489 Gene3D Transferase(Phosphotransferase) domain 1 128 322 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1071 Hepe-Chr1:75489427 Hepe09g0158 Hepe-Chr9:1256377 3.72e-63 dispersed
Hepe01g1071 Hepe-Chr1:75489427 Hepe08g0359 Hepe-Chr8:3219992 1.13e-51 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72453 PF00069 Pkinase 1.30E-66 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1071 K06276 - csv:101212874 918.687