Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1080 ATGTCCGACAAATACACCCACCCCGATCTCCGGCAACTCATGGCCGACAAATCCAACTTTCCGGCCACCTCACAAACCCTAGACTCCTTCTTCCTCCACCACGCCCACCTGCCACCGTCGCACCCGCCGCCGCTGCCCAAGTTCCAGCCTCTCCAGCTCGTCCTGACCGAGCCCGAGGGGTTGCTTCAATTTGGCTGTTCCAACAACAATTCCACCCTTGCGGGAGCCGCCGCCGCCTCGTCAGCTCCATTTTTCCGGCGGAATAAGCTAGTAGTGGAGAGTGATCATCAATGGTTTCCTTATGGAAACGACGTCGTTGGGGGAAGTAATAATGGAGCTAACAGTAGATGGCCAAGACAGGAAACTCTCACTCTTCTTGAGATCAGATCTCGTCTTGATTCCAAGTTTAAAGAGAGTAATCAGAAAGCTCCCCTTTGGGATCAGCTTTCTAGGATGATGTCAGAGGAATACGGGTACAAAAGAAGTGGTAAAAAATGCAAAGAAAAGTTCGACAATTTGTACAAATACTACAAGAAAACAAAGGAAGGCAAAACGGGAAGGCACGACGGTAAGCACTACAGATTCTTCCGGCAACTCGAAGCTATTTACGGCGAATGTAACGACCAATTATCATCCCCCGTTATAGAATCCAACTTCTACAGACCAACCTCCGTCGCTGCCGACGAAGCCAACATTTCTCCGGCCGGGAAATTCCCCAGATCAGAAACGACCAACAACAACAACAACAACAACGACCAAAAGGCGTCGGGCGGCGGAATGAGCCTAAGCTTTTCGATATCGTCTGATTTCGAAACGTCGTCGTCTGGGAACTACCACGACGACGATTTGTCGGCGATAGCGTTTATGATGAATCAGAGGAGGGCGGAGAAAGCGAGAGAAAACGAGATGTCGAAAGCGGAGGGTGGTGGTCGAGGGGGGAGTAGTTGGAGAGAGGAAGTGGAGAAAATGGTGGATTCGAAGCTGAGTAGATTAATGGAGGTGCAAGAGAATTGGATGGAGAAGATAATGGCGAGCGTTGAAGATGGAGAAAAGGAGAGGATTGAGAAAGAGGAAGAATGGAGGAAGCAAGAAATGGCGAGGTTTGATCATGAAATGAATGAGTTTTGTGCGAGGGAGAGATCTTGGCTTCAAGCTCGAGAAGATGCTTTAATGGAGATTGTCAAGAAATTTGCTGGAAAAGGTTATGATTAG 1212 48.93 MSDKYTHPDLRQLMADKSNFPATSQTLDSFFLHHAHLPPSHPPPLPKFQPLQLVLTEPEGLLQFGCSNNNSTLAGAAAASSAPFFRRNKLVVESDHQWFPYGNDVVGGSNNGANSRWPRQETLTLLEIRSRLDSKFKESNQKAPLWDQLSRMMSEEYGYKRSGKKCKEKFDNLYKYYKKTKEGKTGRHDGKHYRFFRQLEAIYGECNDQLSSPVIESNFYRPTSVAADEANISPAGKFPRSETTNNNNNNNDQKASGGGMSLSFSISSDFETSSSGNYHDDDLSAIAFMMNQRRAEKARENEMSKAEGGGRGGSSWREEVEKMVDSKLSRLMEVQENWMEKIMASVEDGEKERIEKEEEWRKQEMARFDHEMNEFCARERSWLQAREDALMEIVKKFAGKGYD 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 75648721 75651860 + Hsped.01g10800.1 Hepe01g1080 560190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1080 403 MobiDBLite consensus disorder prediction 237 260 - -
Hepe01g1080 403 FunFam trihelix transcription factor PTL-like 117 179 - -
Hepe01g1080 403 MobiDBLite consensus disorder prediction 230 260 - -
Hepe01g1080 403 Gene3D - 117 179 - -
Hepe01g1080 403 CDD GT1 115 181 - -
Hepe01g1080 403 PANTHER FI21293P1 105 399 - -
Hepe01g1080 403 Pfam Myb/SANT-like DNA-binding domain 115 202 IPR044822 -
Hepe01g1080 403 MobiDBLite consensus disorder prediction 298 318 - -
Hepe01g1080 403 ProSiteProfiles Myb-like domain profile. 109 174 IPR001005 -
Hepe01g1080 403 Coils Coil 317 337 - -
Hepe01g1080 403 Coils Coil 339 359 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1080 Hepe-Chr1:75648721 Hepe05g0345 Hepe-Chr5:4216002 7.20e-51 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54806 PF13837 Myb_DNA-bind_4 1.50E-18 CL0123 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1080 - - - 0.0