Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1104 ATGGAGAAAAGGGTCAAAGGCAAGTCTGGAAGACTTGGTCTTGATCTCGAAGATTCAGGGGAGCTGAGGGAAGACGAAGACAACCCAAAAATGGGGGTGCCTGCAACTTTGGGCGACGATGATTTTCTCAGAGAAAGAGCGGCAAAGATGAGAGAATCACTGCAAAAGAGCCAAACCATTACCGATAACGTCGTCTCCATTCTCGGCTCCTTCGACCACCGTCTTTCTGCTCTCGAAACCGCCATGCGCCCTACTCAGATCAGAACTCATTCAATTCGTAAAGCTCATGAGAACATTGATAAGACTTTGAAGGCTGCGGAGGTTATTTTAACACAATTTGATCTCTCTCGTCAGGCAGAAACAAAAATACTTAAAGGGCCACATGAGGATTTGGAGAGTTATCTCGGGGCAATTGGTCAATTAAGAAACATTATTAAATTCTTTAGCAGCCATAAAGGTTTTAAGAGTAGTGAGGTAGTGCTTAACCAGGCAAATAATCTGCTTGCAAAAGCCATCTCAAAGCTGGAAGATGAGTTCAGACAGCTATTATCGTCCTACAGCAAACCTGTGGAGCCTGAGCGTCTTTTCGATTGCCTGCCAAAATCGTTGCAACCATCTTCAGAATCTCCTGGTCAACATGATAGTTCAGGTGGAAAACATCCCTCCTCAAATCATCATTCTGTACATCATGATAATAACTTGGAGACTGCTGTCTACACTCCTCCCACTCTCATACCACCACGTGTTCTACCACTGCTGCATGATTTATCACAGCAGATGGTTCAAGCTGGTCATCAACAACAAATTCTAAAAATTTATAAGGATACCCGTTCAGTCGTTCTGGAAGAAAGCCTACGGAAATTGGGAGTTGAAAAACTCAGCAAAGATGATGTCCAGAAGATGGCATGGGAGGTGTTAGAGGCAAAAATTGGGAACTGGATTCATTTTATGCGTATTGCAGTCAAACTGCTGTTTGCTGGAGAACGAAAAGTGTGCGATCAAATTTTTGAAGGCTTTGAATTGCTTAGAGATCAATCATTTGCAGAGGTTACAAGTAGTAGTGTGTCTGTGCTATTCAGTTTTGGGGAGGCGATTGCTAAAAGCAAGAGGTCACCAGAAAAGTTGTTTGTACTTTTGGACATGTATGAAATAATGCGAGAGCTTCACTCAGAGATTGAGACAATTTTTAAGGGTAAAGCGTGCAATGAGATCAGGGAATCTGCATCGGGTTTGACCAAATGGCTTGCACAGACAGCTAAAGATACATTTGGTGATTTTGAGGAAGCTGTTGAAAAAGATGCCACAAAAACTGCGGTGTTGGATGGAACTGTTCATCCTTTAACAAGCTATGTGATTAATTATGTCAAATTTCTTTTTGACTATCAAGCAACCTTGAAGCAGCTTTTCCAAGAATTTGTAGAAAGCGGTCAAACGAGCTCGGAATTGGCCACCGTCACAATGCAAATAATGCAGGCTCTTCAATCTAATTTGGATGGAAAATCTAAGCATTACAGAGATCCTGCTTTGACTCACTTATTCCTCATGAACAACATTCACTATATAGTTAGATCTGTTCGCAGATCTGAAGCCAAGGATTTGCTAGGGGACGATTGGGTTCAGAGACATAGGAGGGTTGTACAACAACATGCAAATCAGTATAAAAGGAATGCTTGGTCAAAGATTCTGCAATGTCTCTCTGTTCAAGGATTAACTTCATCTGGCGGTGGCAGCGTACCCGGTATAGATGGAGGAAACAGTAGCGGAGTTTCTAGGGCACTTATTAAAGACAGGTTCAAGACTTTCAACATGCAGTTTGAGGAACTGCATCAAAGACAATCTCAATGGGCAGTTCCCGATACCGAGTTGCGGGAGTCTCTAAGACTTTCAGTTGCTGAAATCTTACTTCCTGCATACAGATCCTTCCTAAAACGTTTTGCGCCATTAGTGGATGCTGGAAAGAATCCCCAAAAGTATGTCAGATACCAGCCAGAGGATCTCGAAAGGATGCTCGGAGAATTTTTCGAGGGGAAGAACGTGAGTGATTCTAAGCGGTAG 2055 42.73 MEKRVKGKSGRLGLDLEDSGELREDEDNPKMGVPATLGDDDFLRERAAKMRESLQKSQTITDNVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAEVILTQFDLSRQAETKILKGPHEDLESYLGAIGQLRNIIKFFSSHKGFKSSEVVLNQANNLLAKAISKLEDEFRQLLSSYSKPVEPERLFDCLPKSLQPSSESPGQHDSSGGKHPSSNHHSVHHDNNLETAVYTPPTLIPPRVLPLLHDLSQQMVQAGHQQQILKIYKDTRSVVLEESLRKLGVEKLSKDDVQKMAWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFELLRDQSFAEVTSSSVSVLFSFGEAIAKSKRSPEKLFVLLDMYEIMRELHSEIETIFKGKACNEIRESASGLTKWLAQTAKDTFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQATLKQLFQEFVESGQTSSELATVTMQIMQALQSNLDGKSKHYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRVVQQHANQYKRNAWSKILQCLSVQGLTSSGGGSVPGIDGGNSSGVSRALIKDRFKTFNMQFEELHQRQSQWAVPDTELRESLRLSVAEILLPAYRSFLKRFAPLVDAGKNPQKYVRYQPEDLERMLGEFFEGKNVSDSKR 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 75944957 75954350 - Hsped.01g11040.1 Hepe01g1104 560214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1104 684 Pfam Exo70 exocyst complex subunit C-terminal 312 671 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Hepe01g1104 684 Coils Coil 161 181 - -
Hepe01g1104 684 PANTHER EXOCYST COMPLEX PROTEIN EXO70 46 677 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Hepe01g1104 684 MobiDBLite consensus disorder prediction 202 222 - -
Hepe01g1104 684 Gene3D Exocyst complex component Exo70 107 684 - -
Hepe01g1104 684 MobiDBLite consensus disorder prediction 200 229 - -
Hepe01g1104 684 SUPERFAMILY Cullin repeat-like 109 675 IPR016159 -
Hepe01g1104 684 MobiDBLite consensus disorder prediction 1 30 - -
Hepe01g1104 684 Pfam Exocyst complex component Exo70 N-terminal 102 184 - -
Hepe01g1104 684 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1104 Hepe-Chr1:75944957 Hepe04g1072 Hepe-Chr4:65363907 0.0 dispersed
Hepe01g1104 Hepe-Chr1:75944957 Hepe09g0051 Hepe-Chr9:422913 3.80e-114 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1104 K07195 - csv:101206262 1176.39