Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1165 ATGGAGAAATTTCCTCCAATCTATCTGTTTTCTCTCCTCTGCAACTTCTTCTGCCTTTCAATGGCGGCTTTGAACAATGAGGGAAATGCCCTTTTGTCCTTCAAACAATCCATTACTGAAGATCCAGAGAGCTCTCTCAGCAACTGGAATTCTTCAGATGAAACTCCTTGTTCTTGGAATGGAGTTACATGCAAGGATCTGAGAGTTGTTTCTCTTAGCATTCCCAAGAAGAAACTTAATGGGATTCTTCCTTCTTCTCTAGGGTTTCTCTCTGAGCTTCGTCATGTGAATCTGAGGAGTAATAAACTCCATGGAACCTTGCCAGTGGAGCTTTTTCAAGCTAATGGAATCCAAAGTTTGGTGCTTTATGGGAATTCCTTTTCTGGGTCTGTCCCAAATGAGATTGGTAAGCTCAAAAACCTTCAAATCTTGGATTTTTCTCAGAATTTCTTTAATGGGTCGTTGCCTGTTTCCTTAATGCAATGCAGAAGATTGAGAATTCTTGATCTCAGTCAGAATAATTTCACCAATTCTCTGCCTGTTGGGTTTGGTTTGAGTTTGAATTTCTTGGAAAAATTGGATATTTCTTACAATAAGTTCAATGGTTCAATCCCAATGGATATTGGTAATTTGTCTAGTTTGCAAGGGACTGTTGATTTGTCACATAATTTGTTTTCTGGTTCTATCCCACCTAGCTTGGGGAACCTTCCTGAAAAGGTTTATATTGATCTTACTTATAATAATTTGAGTGGTTCAATACCCCAAAATGGTGCTCTTATGAACAGAGGACCAACTGCTTTTATTGGGAATCCTGGCCTTTGTGGACCGCCTTTGAAGAATCCGTGTTCTTCTGAAACTCCGGGTGCGAGTTCCCCATCCTCGTTCCCGTTTTTCCCGGACAATTATCCACCGGGGAGTTCTGCGGGTAATGGTAATAAGTATGACAAAGGAGGGATGAGTAAGAGCACTGTGGTTGCAATAATCATCAGCGACATTATCGGCATTTGCCTGATCGGGTTGCTGTTTTCGTATTGCTATTCGAGGTTTTGCACTCATAGAAATGGGAAGAAGAAGGCAGACCAATCTAATTATGGTTTTGAGAAGGGTGAGAAAGTTAGGAAGGATTGTCTCTGCTTTCAAAAGGGTGAATCCGAGAACGTTTCGGAGCATATCGAGCAGTTTGATTTGGTACCTCTGGATTCACAAGTGACGTTTGATCTCGACGAACTTCTCAAGGCATCAGCATTTGTTTTGGGAAAAAGCGGTATCGGGATAGTGTATAAAGTTGTGCTTGAAGATGGACTTACTTTAGCTGTGAGAAGATTGGGTGAAGGAGGTTCTCAAAGATTTAAAGAATTTCAAACTGAAGTTGAAGCAATTGGGAAGTTGAGGCATCCAAATGTTGTTAGCCTTAGAGCATATTATTGGTCTGTTGATGAGAAACTGCTCATTTATGATTACATACCAAATGGGAGCCTTGCATTTGCCATTCATGGGAAGCCTGGAGCGGCATCGTTTACACCGTTGCCGTGGTCTGCTCGGTTAAGAATCATGGAAGGCATTGCGAAAGGGTTGGTTTACTTGCACGAGTATAGCCCAAAAAAGTATGTCCATGGTAGTTTGAAGACGAACAACATAGTTCTGGGACACGACATGGTACCACATATTTCTAATTTCGGGCTCGCCCGTCTCGTTAACATCGCGGGAGGATCTCCAACCGTGCAATCGAGTCATATGGCAGAGGAAAAACCACAAGAGAAACAACAAAAGTCTGCAACCTCTGAAGCTAGTACATTCAGTTCTAATATGAGTTCTTACTACCAAGCCCCGGAAGCGCTCAAAGTCGTGAAGCCATCGCAGAAATGGGACGTATACTCGTACGGTGTGATATTACTCGAAATGATCACCGGAAGGATGCCTATAGTTCAGGTGGGAGCCTCGGAAATGGATCTTGTTCAATGGATTCAACTCTGCATTGAGGAAAAGAAGCCACTTTCGGACGTGATAGACCCGTCTTTGACTCCAGACGACGATTCAGACGAGGAGATCATCACGGTTTTGAAGATAGCGTTAGCTTGTGTTCAAAATAGTCCCGAAAGAAGACCGTCGATGAGGCATGTTTCTGATGCTTTGAGCAGGATGGCTGTCACTCCAAACTGA 2160 42.78 MEKFPPIYLFSLLCNFFCLSMAALNNEGNALLSFKQSITEDPESSLSNWNSSDETPCSWNGVTCKDLRVVSLSIPKKKLNGILPSSLGFLSELRHVNLRSNKLHGTLPVELFQANGIQSLVLYGNSFSGSVPNEIGKLKNLQILDFSQNFFNGSLPVSLMQCRRLRILDLSQNNFTNSLPVGFGLSLNFLEKLDISYNKFNGSIPMDIGNLSSLQGTVDLSHNLFSGSIPPSLGNLPEKVYIDLTYNNLSGSIPQNGALMNRGPTAFIGNPGLCGPPLKNPCSSETPGASSPSSFPFFPDNYPPGSSAGNGNKYDKGGMSKSTVVAIIISDIIGICLIGLLFSYCYSRFCTHRNGKKKADQSNYGFEKGEKVRKDCLCFQKGESENVSEHIEQFDLVPLDSQVTFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNVVSLRAYYWSVDEKLLIYDYIPNGSLAFAIHGKPGAASFTPLPWSARLRIMEGIAKGLVYLHEYSPKKYVHGSLKTNNIVLGHDMVPHISNFGLARLVNIAGGSPTVQSSHMAEEKPQEKQQKSATSEASTFSSNMSSYYQAPEALKVVKPSQKWDVYSYGVILLEMITGRMPIVQVGASEMDLVQWIQLCIEEKKPLSDVIDPSLTPDDDSDEEIITVLKIALACVQNSPERRPSMRHVSDALSRMAVTPN 719
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 76776293 76779038 - Hsped.01g11650.1 Hepe01g1165 560275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1165 719 ProSiteProfiles Protein kinase domain profile. 412 714 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1165 719 CDD STKc_IRAK 418 714 - -
Hepe01g1165 719 Gene3D Transferase(Phosphotransferase) domain 1 488 718 - -
Hepe01g1165 719 Gene3D Phosphorylase Kinase; domain 1 380 487 - -
Hepe01g1165 719 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 185 - -
Hepe01g1165 719 Pfam Leucine Rich Repeat 164 184 IPR001611 GO:0005515(InterPro)
Hepe01g1165 719 Pfam Leucine Rich Repeat 190 211 IPR001611 GO:0005515(InterPro)
Hepe01g1165 719 Pfam Leucine Rich Repeat 117 138 IPR001611 GO:0005515(InterPro)
Hepe01g1165 719 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515(InterPro)
Hepe01g1165 719 Pfam Leucine Rich Repeat 218 236 IPR001611 GO:0005515(InterPro)
Hepe01g1165 719 SUPERFAMILY Protein kinase-like (PK-like) 417 711 IPR011009 -
Hepe01g1165 719 Gene3D Ribonuclease Inhibitor 24 183 IPR032675 -
Hepe01g1165 719 FunFam Leucine-rich repeat protein kinase family protein 488 717 - -
Hepe01g1165 719 FunFam Leucine-rich repeat receptor-like protein kinase 189 284 - -
Hepe01g1165 719 PANTHER OS05G0588300 PROTEIN 189 715 IPR050994 -
Hepe01g1165 719 MobiDBLite consensus disorder prediction 573 595 - -
Hepe01g1165 719 Pfam Protein kinase domain 418 707 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1165 719 Gene3D Ribonuclease Inhibitor 184 284 IPR032675 -
Hepe01g1165 719 SUPERFAMILY L domain-like 26 279 - -
Hepe01g1165 719 MobiDBLite consensus disorder prediction 700 719 - -
Hepe01g1165 719 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Hepe01g1165 719 FunFam Leucine-rich repeat receptor-like protein kinase 395 487 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1165 Hepe-Chr1:76776293 Hepe05g0329 Hepe-Chr5:4056429 5.97e-67 dispersed
Hepe10g0328 Hepe-Chr10:3500293 Hepe01g1165 Hepe-Chr1:76776293 2.21e-35 dispersed
Hepe01g1165 Hepe-Chr1:76776293 Hepe01g1171 Hepe-Chr1:76864514 3.82e-59 proximal
Hepe02g2677 Hepe-Chr2:74475455 Hepe01g1165 Hepe-Chr1:76776293 3.71e-199 transposed
Hepe04g0345 Hepe-Chr4:51100816 Hepe01g1165 Hepe-Chr1:76776293 3.75e-87 transposed
Hepe07g0446 Hepe-Chr7:4599220 Hepe01g1165 Hepe-Chr1:76776293 4.02e-81 transposed
Hepe08g1156 Hepe-Chr8:11715598 Hepe01g1165 Hepe-Chr1:76776293 1.67e-83 transposed
Hepe10g1528 Hepe-Chr10:52008438 Hepe01g1165 Hepe-Chr1:76776293 1.40e-121 transposed
Hepe01g1165 Hepe-Chr1:76776293 Hepe02g3423 Hepe-Chr2:83612214 1.63e-147 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72456 PF00069 Pkinase 4.30E-29 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1165 - - - 0.0