Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1170 ATGGCTTCCAGAGAAGGGAGGCGCCATCATCATCATCAGCATCACAATCTGGTTCCTCTTGCTGCTTTGATCAGTAGAGAGGTGAGGAGCGAGAGATTGGAGAAACCCACTGTAAGATATGGAAATGCAGCGCAGTCTAGAAAGGGGGAAGATTATTTTCTCATGAAAACTGATTGTCAGCGAGTTCCTGGGAACCCTTCATCCACTTTCTCTGTTTTTGCTATATTTGATGGACACAATGGAAATGCTGCAGCAATTTTCACGAAGGAACATTTGTTGAGTCATGTCTTGGGTGCACTTCCCCGTGGCCTCGGGCAAGAGGAGTGGCTTCAAGCTCTACCACGAGCTTTGGTTGCTGGATTTGTGAAGACAGACAAGGAGTTTCAGAGCAGAGGTGAAACTTCTGGAACTACAGCTACGTTTGTAATCATCGATGGATGGACAGTGACGGTAGCGTCGGTTGGAGATTCTCGATGTATTTTAGATACTCAGGGTGGTGCTGTCTCTGCTTTAACGGTTGATCATAGACTTGAAGAGAATGTTGAAGAGAGAGAACGCGTGACTGCAAGCGGTGGGGAAATCGGAAGATTAAGCATTGTTGGTGGTGCTGAGATCGGCCCGCTCCGTTGTTGGCCAGGAGGCTTATGCCTTTCTCGATCAATTGGAGACATGGATGTTGGAGAGTTTATAGTTCCAATTCCATTTGTGAAACAAGTAAAGTTATCAAATGCTGGTGGGAGGCTTATAATTGCTTCTGATGGCATCTGGGACGCCCTATCATCAGATATGGCTGCAAAGTCCTGCCGTGGACTACCGGCAGAGCTTGCTGCTAGGCAAGTTGTGAAGGAAGCCTTAAGAACAAGAGGCTTGAAAGATGATACAACCTGCATAGTTGTTGACATAATTCCTCCTGATAATTCAGCACAGTCTTCCCCTCCTCCAAAGAAACAAAGTGTACTGAAATCTCTATTATTCAGGAAAAAGTCTCACAGTTCTAATAAGCTATCCAAGAGGCTATCAGCTATCGGTCTCGTGGAAGAATTATTTGAAGACGGCTCTGCCATGCTGGCTGAAAGGCTTGGAACTGTAGAGTTGAGTGGATCTGGACATGGGACACCCAGCCTGTTCACTTGTGCTGTATGTCAAGTAGATCTTGCTCCTACTGAGGGCATCTCTGTTCATGCTGGTTCAATCTTCTCCACCAGCTCAAAGCCATGGCAAGGCCCTTTCCTGTGTGCCGATTGTCGAAACAAGAAGGACGCCATGGAAGGAAAACGTCCGAGCGGGGTGAGAGTGTCGTAG 1302 47.08 MASREGRRHHHHQHHNLVPLAALISREVRSERLEKPTVRYGNAAQSRKGEDYFLMKTDCQRVPGNPSSTFSVFAIFDGHNGNAAAIFTKEHLLSHVLGALPRGLGQEEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIIDGWTVTVASVGDSRCILDTQGGAVSALTVDHRLEENVEERERVTASGGEIGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPFVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAARQVVKEALRTRGLKDDTTCIVVDIIPPDNSAQSSPPPKKQSVLKSLLFRKKSHSSNKLSKRLSAIGLVEELFEDGSAMLAERLGTVELSGSGHGTPSLFTCAVCQVDLAPTEGISVHAGSIFSTSSKPWQGPFLCADCRNKKDAMEGKRPSGVRVS 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 76848447 76852117 + Hsped.01g11700.1 Hepe01g1170 560280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1170 433 ProSiteProfiles PPM-type phosphatase domain profile. 32 301 IPR001932 -
Hepe01g1170 433 CDD PP2Cc 48 301 IPR001932 -
Hepe01g1170 433 SUPERFAMILY PP2C-like 45 301 IPR036457 -
Hepe01g1170 433 SMART PP2C_4 29 299 IPR001932 -
Hepe01g1170 433 Pfam Protein phosphatase 2C 65 286 IPR001932 -
Hepe01g1170 433 PANTHER PROTEIN PHOSPHATASE 40 300 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe01g1170 433 Gene3D - 40 308 IPR036457 -
Hepe01g1170 433 SMART PP2C_SIG_2 34 301 IPR001932 -
Hepe01g1170 433 FunFam probable protein phosphatase 2C 5 39 306 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1170 Hepe-Chr1:76848447 Hepe09g1703 Hepe-Chr9:51781406 4.12e-209 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1170 - - - 0.0