Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1171 ATGGCGGCGTCCACTCTGCTCTCGCATTTAGCTCTTTGTCTTTGTCTACTCCATTACACATGTCTTTATGCTTCTTCGAACCCAGATTTAGACGCTTTAATGGCGTTCAAAGTGTCGTCTGATAAAGGAAACAAGCTCTCCACATGGAACTCTACCTCTAACCCATGTGCTTGGGATGGAGTCTCTTGTCTCAGAAACAGAGTCTCGAGGTTGGTTCTTGAGAATCTCGATCTTACAGGCTCTATCGGACCTCTCACTGGTTTGACTCAGTTACGAGTGCTGAGCCTCAAGCGGAATCGTCTCACCGGCTCCATTCCCGATCTCTCCAACTTCACCGCTCTGAAACTCGTGTTTCTCTCGTATAATGAATTTTCCGGTGAGTTTCCGGCGTCTTTGCTGTCTCTCGTCCGGCTCTACCGTCTCGATCTCTCTCACAATAACCTAACCGGAGAGATTCCAGCTGCTGTTAACCGTTTGACTCAACTTCTCACTCTCCGCCTCGAAGATAACCGGTTTTCTGGTCCGATTTTGGAAATGAACCTGCCGAATCTTCAGGACTTCAACATTTCTGCAAACCGTCTCACCGGCGAAATCCCTAAATCGTTGTCGACATTTCCGGAGTCGTCTTTCGGTCAAAACTTAGGTTTATGTGGATCTCCTCTACAGAGCTGCAAGAGCATTGTCAGTAACCCGACGGAGCCCGGATCGGAAGGCGCAATCGCCTCGCCGATAACACCACCGCCACGGAACCTCACGGTTTCATCTTCTCCGACTTCGCTTCCCGGAGTTACATCCGAAACAAAGCCGGAAAATCCCCACCGCACCGGCACCGGGAAGATAGGTTCTCTAGCGCTAATCGCCATAATTCTCGGTGACGTTTTAGTGTTAGCGGTGGTCTCACTTCTTCTGTACTGCTATTTCTGGAAAAACTCGTCCGAGAAATCCGGGAAGAAGTCGAAGGTTGTGGAGAGCGAGAAGATGGTTTACTCTTCGAGTCCGTATCCGGCGCAGGGAGGAACGGAGAGGGGTCGGATGGTGTTCTTCGAGGGAGTGAAGAAATTCGAGCTGGAAGATTTGCTTAGAGCGTCGGCGGAAATGCTCGGAAAAGGTGGGTTCGGAACGTCGTACAAGGCGATACTCGACGACGGGAATGTGGTGGCGGTGAAGCGGCTGAAAGATGCTCAGGTCGGAGGGAAACGTGAGTTCGAGCAGCATATGGAGGTTTTGGGAAGATTGCGACATGGGAATATTGTAAGCTTGAGAGCTTACTATTTTGCCAGAGAGGAGAAGTTATTGGTGTTTGATTACATGCCCAATGCCAGCTTGTTCTGGCTTCTTCATGGGAACAGAGGCCCTGGACGGACGCCGTTGGACTGGACGACACGGTTGAAGATCGCCGCCGGAGCGGCTAGAGGTTTGGCCTTCATTCACAACTCCTGTAAATCCCTCCGCCTCGCCCATGGCAATGTTAAATCCACCAATGTACTTTTGGATCAATCTGGAAATGCTCGAGTCTCCGATTTCGGATTGTCCCTTTTCACTCCCCCTTCCACTCCTCGATCCAACGGCTACCGAGCCCCAGAGTGCGGCGAGGGCCGGAAATTAACTCAGAAATCCGACGTGTACTCGTTCGGGGTTCTTCTCCTCGAGGTGCTGACAGGAAAGTGCCCCTCCGTCTTGGAGAATGGCGGCGCGGGAGGCGGTGGATACGGCGGGGTGTTGGATTTGCCTCGGTGGGTTCAGTCGGTGGTGCGAGAGGAATGGACGGCGGAGGTTTTTGATTTGGAGCTGATGAGATACAAAGACATTGAAGAGGAAATGGTGGGGCTTCTGCAGATTGCATTGGCTTGTACATCGACTTCGCCGGATCAACGGCCGAAGATGAGCCATGTGGTGAAGATGATCGACGAGCTCCGTGGGGTGGAGGTGTCGCCGTTACACGACGGCTCCGACTCGGTGACGGAGTCGCCGTCGGTGTCGGAGGGCACTTGCGGCGGAGGAGCCAGTCAGTAA 2013 52.66 MAASTLLSHLALCLCLLHYTCLYASSNPDLDALMAFKVSSDKGNKLSTWNSTSNPCAWDGVSCLRNRVSRLVLENLDLTGSIGPLTGLTQLRVLSLKRNRLTGSIPDLSNFTALKLVFLSYNEFSGEFPASLLSLVRLYRLDLSHNNLTGEIPAAVNRLTQLLTLRLEDNRFSGPILEMNLPNLQDFNISANRLTGEIPKSLSTFPESSFGQNLGLCGSPLQSCKSIVSNPTEPGSEGAIASPITPPPRNLTVSSSPTSLPGVTSETKPENPHRTGTGKIGSLALIAIILGDVLVLAVVSLLLYCYFWKNSSEKSGKKSKVVESEKMVYSSSPYPAQGGTERGRMVFFEGVKKFELEDLLRASAEMLGKGGFGTSYKAILDDGNVVAVKRLKDAQVGGKREFEQHMEVLGRLRHGNIVSLRAYYFAREEKLLVFDYMPNASLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGLAFIHNSCKSLRLAHGNVKSTNVLLDQSGNARVSDFGLSLFTPPSTPRSNGYRAPECGEGRKLTQKSDVYSFGVLLLEVLTGKCPSVLENGGAGGGGYGGVLDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVGLLQIALACTSTSPDQRPKMSHVVKMIDELRGVEVSPLHDGSDSVTESPSVSEGTCGGGASQ 670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 76864514 76868105 + Hsped.01g11710.1 Hepe01g1171 560281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1171 670 PANTHER OS05G0588300 PROTEIN 10 644 IPR050994 -
Hepe01g1171 670 SUPERFAMILY L domain-like 42 205 - -
Hepe01g1171 670 ProSiteProfiles Protein kinase domain profile. 361 639 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1171 670 MobiDBLite consensus disorder prediction 232 275 - -
Hepe01g1171 670 Pfam Leucine Rich Repeat 138 158 IPR001611 GO:0005515(InterPro)
Hepe01g1171 670 Pfam Leucine Rich Repeat 183 204 IPR001611 GO:0005515(InterPro)
Hepe01g1171 670 Pfam Leucine Rich Repeat 90 107 IPR001611 GO:0005515(InterPro)
Hepe01g1171 670 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 437 645 - -
Hepe01g1171 670 MobiDBLite consensus disorder prediction 247 271 - -
Hepe01g1171 670 MobiDBLite consensus disorder prediction 644 670 - -
Hepe01g1171 670 Gene3D Ribonuclease Inhibitor 21 85 IPR032675 -
Hepe01g1171 670 Gene3D Ribonuclease Inhibitor 86 230 IPR032675 -
Hepe01g1171 670 MobiDBLite consensus disorder prediction 649 670 - -
Hepe01g1171 670 Gene3D Transferase(Phosphotransferase) domain 1 437 649 - -
Hepe01g1171 670 ProSiteProfiles Leucine-rich repeat profile. 90 112 IPR001611 GO:0005515(InterPro)
Hepe01g1171 670 FunFam Nuclear pore complex protein NUP107 26 178 - -
Hepe01g1171 670 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Hepe01g1171 670 Pfam Protein tyrosine and serine/threonine kinase 365 634 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g1171 670 CDD STKc_IRAK 367 638 - -
Hepe01g1171 670 SUPERFAMILY Protein kinase-like (PK-like) 365 635 IPR011009 -
Hepe01g1171 670 FunFam pollen receptor-like kinase 1 333 436 - -
Hepe01g1171 670 Gene3D Phosphorylase Kinase; domain 1 337 436 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0674 Hepe-Chr1:68953899 Hepe01g1171 Hepe-Chr1:76864514 2.20e-78 dispersed
Hepe01g1171 Hepe-Chr1:76864514 Hepe05g0329 Hepe-Chr5:4056429 2.94e-131 dispersed
Hepe01g1165 Hepe-Chr1:76776293 Hepe01g1171 Hepe-Chr1:76864514 3.82e-59 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72458 PF00069 Pkinase 2.10E-32 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1171 - - - 0.0