Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe01g1189 | ATGAGAATGAGCTGCAATGGGTGTCGAATTCTTCGCAAAGGATGTAGCGACGACTGTATAATTAGACCTTGTCTTCAATGGATTCCCTCGCCGGATTCTCAAGCCAACGCCACCATTTTTCTCGCCAAATTTTACGGCCGCGCCGGCCTCTTCAACCTCATCACCGCCGCCGCCCAACACCTCCGCCCTGCCATTTTCAAGTCGTTGTTGTACGAGGCGTGCGGGCGTATGGTGAATCCTGTCTACGGCTCCGTTGGACTGCTCTCCTCCGGCGATTGGGAAAGGTGTCAGGCCGCCGTCGACGCCGTGTTGACCGGATCCATGAACGTCGAACCCGACGTGCCACCGTCGAACACTAACCTCTCTCTCAAATGCTGCGACATTCGTCATGTCTCTAACGATACCAATTTGGCTGTTTCCGGCGAGCATCTCAAGGTCAAGGCTCGGAGCCGGTTCAAGAAGCCCGACCACCGGACCAAACCAAAACCTGGACAGGCTCATGAGTTGGGAAGTGGGTCTAATAATGTGGATGAGTTGGAGTTAGAGGCGAACCACCGGGTGGAAATGGTGGAGGGTTTGAATTTGATGATGAACCGGAGGAAACCGGGTCGAGTTTTGAGAAATGGAAGCCGGTTTGAGAAGGAGGATGTTGAGCTGGAACTTACTCTTAATTCGGCTCAGTTAGGGAAGAAAAATTAG | 699 | 52.93 | MRMSCNGCRILRKGCSDDCIIRPCLQWIPSPDSQANATIFLAKFYGRAGLFNLITAAAQHLRPAIFKSLLYEACGRMVNPVYGSVGLLSSGDWERCQAAVDAVLTGSMNVEPDVPPSNTNLSLKCCDIRHVSNDTNLAVSGEHLKVKARSRFKKPDHRTKPKPGQAHELGSGSNNVDELELEANHRVEMVEGLNLMMNRRKPGRVLRNGSRFEKEDVELELTLNSAQLGKKN | 232 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 77054070 | 77056137 | + | Hsped.01g11890.1 | Hepe01g1189 | 560299 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe01g1189 | 232 | MobiDBLite | consensus disorder prediction | 148 | 175 | - | - | |
Hepe01g1189 | 232 | Pfam | Lateral organ boundaries (LOB) domain | 4 | 103 | IPR004883 | - | |
Hepe01g1189 | 232 | ProSiteProfiles | LOB domain profile. | 3 | 109 | IPR004883 | - | |
Hepe01g1189 | 232 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 223 | - | GO:0010468(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g1189 | Hepe-Chr1:77054070 | Hepe02g0980 | Hepe-Chr2:11929986 | 5.55e-67 | dispersed | |
Hepe01g1189 | Hepe-Chr1:77054070 | Hepe09g0340 | Hepe-Chr9:2984055 | 5.97e-62 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54809 | PF03195 | LOB | 3.60E-23 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe01g1189 | - | - | - | 0.0 |