Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe01g1234 | ATGAGTAGCTGGAAGAAGATTCCAGCAATGTGTTCTTCTTCTCGCACTCTCCTTCTGTTTCCTCTCCTTCTTCACGCGTTCGTGGCGCTGGTCTCTGCTCAGGGATCTAATAATACCTCTCTATGGCAGACTCTGGGTGGAAATGCTCCATTGGTTGTGGCTCGCGGTGGATTTTCAGGGCTGTTTCCTGATTCGAGCGGAACTGCTTACAATTTTGCACTTCAGGTTAGTGTTCCTAATGTGATCTTATGGTGCGATGTGCAATTAACTAAAGATGGAGTTGGAATGTGTCTCCCGGATCTGAGGCTTGGCAATTCTACTGACGCTGCGGACTTTCTGGGAGCGAACCGCAGCAATGTCTATCTTGTTAATGGAGTCCGTACCGACGGATTGTTTACGGTTGATTTCACTTTCAAAGATCTGGCAAATGTTTCTGTTGTTCAAGGTATCTTTTCTCGATCTAACAAGTTTGATGGCAATCAGTTTCTTATTCTCACTCCTGATGATGTGGCTAATGAGTTCAAGCCACCGGGACTTTGGCTGAATATTCAGCATGATGCATTCTTCACACAACAAAACTTGAGCATGAGGAACTATGTACTTTCTGTATCCAGACGCATCGTTGTTAACTACATATCATCACCAGAGGTGGGATTTCTTAGAAGTATAGCTGCAAGATTTAATCCCCTCACAACAAAGTTGATCCTTCGGGTTTTAGGACCAACCGATATTGAGGTTACTACCAATCAGACATATGACTCTCTCTTACGCAATCTCACCTTTATCAAGACATTTGCTTCTGGAATTCTTGTTCCTAAGACTTATATATGGCCCATTGATAGAGATGGTTACATACTACCTCAAACCTCTCTTGTTTCTGATGCTCATAAAGCACAGCTGGAGGTTTTTGCATCAGAGTTCTATAGTGATCTTCCACTAGCCTACAACTACAGTTATGACCCCATTACTGAATACCTGTCATACATTGACAATGGTAAATTTTCAGTGGATGGTGTGCTCACTGATTTCCCTATTAGTCCATCGGAAGCTATTGATTGTTTTGCTCATTTGGATAAGAATGCAAAAAGTCAAGCTAAGCCTTTGGTTATTTCCAAATTTGGAGCTAGTGGAGACTTACCTGCTTGCACAGACTTGGCGTATTCCAAGGCTATTTCAGATGGTGTAGAAGTGCTTGACTGTCCTGTTCAAATAGCACAAGATGGAACACCATTTTGCATGAGCTCAATTAATCTTATAGATAGCACAACTATATCTCAAACACCATTCACTACTCGTTCAAAGAAAATTCCCGAAATTGGTCCTAATGACGGAATATTTGCTTTTGACTTAACATGGGAAGAGATTCAAGGCCTGACCCCGTCAATATTGAACCCTTTTTCGAAGTACACGTTGTTCCGAAACCCAAGATTCCGTAACAGTGGGAAATTCGTAACACTATCTGATTTCTTGGCCTTGGCAAAGAATGCAAGCACTCTTTCTGGTGTCTTGATCCAAATTGAGAATGCAGCCTACCTTGCTAAGGAACAGGGTTTAAGTGTAACTGATGCGGTCTTTGATTCCTTGAGCAAAGCTGGTTATGATAATCAGACAGCCCTGAAAGTATTGATTCAATCTCCAAATAGCCCTGTTCTAATAAAATTTAAAGAGGAAAAGAAAAATTACGAGCTTGTTTATGAAGTTGACGAGTCAATTAGTGATGTGCTTAATTCAACTGTCGTGGACATCAAGAGTTTTGCCGACTCCGTGACTATCAGCAAGACCTCTGTCTTTCCTATAAATCAGCTATTTGTCACTGGATCTACAGATGTTGTGCAGAAGCTGAAATCACTTAATCTCTCTGTATATGTGCAAACCTTCAGCAATGAATTTGTCTCTCAAGCATGGGATTTCTTCTCAGATGCAACAGTAGAGATCAACTCATATGTTATGGGAGCCGAGATTGATGGAGTCGTCACCGACTTTCCAAAGACATCTGCTAGATATAAAAAGAACCGATGCTTGACAATGAAAGAAACACCAAGTTACATGAGCCCTGCCCAGCCTGGTGCCTTGTTACAACTTGTTACTCCGGAGTACTTGCCTCCAAAGGAAGCTCCAAACCCGGTTCTAGATGACAAGGACGTAACCGAGCCACCATTGCCTCCGACCTCGGTCAAAGCCCCACCACCTGCTGGGGAAGGTGGCTCTGCAGCAGCACCTTCAACTCGACCCAATGGACAACCTAAGCTTGGAGCTGGGTCTGGCTTCTTGCTCTTGAACCTTGCCATACTTTCCATTGCTCTTCTTCCATTCTGA | 2316 | 42.92 | MSSWKKIPAMCSSSRTLLLFPLLLHAFVALVSAQGSNNTSLWQTLGGNAPLVVARGGFSGLFPDSSGTAYNFALQVSVPNVILWCDVQLTKDGVGMCLPDLRLGNSTDAADFLGANRSNVYLVNGVRTDGLFTVDFTFKDLANVSVVQGIFSRSNKFDGNQFLILTPDDVANEFKPPGLWLNIQHDAFFTQQNLSMRNYVLSVSRRIVVNYISSPEVGFLRSIAARFNPLTTKLILRVLGPTDIEVTTNQTYDSLLRNLTFIKTFASGILVPKTYIWPIDRDGYILPQTSLVSDAHKAQLEVFASEFYSDLPLAYNYSYDPITEYLSYIDNGKFSVDGVLTDFPISPSEAIDCFAHLDKNAKSQAKPLVISKFGASGDLPACTDLAYSKAISDGVEVLDCPVQIAQDGTPFCMSSINLIDSTTISQTPFTTRSKKIPEIGPNDGIFAFDLTWEEIQGLTPSILNPFSKYTLFRNPRFRNSGKFVTLSDFLALAKNASTLSGVLIQIENAAYLAKEQGLSVTDAVFDSLSKAGYDNQTALKVLIQSPNSPVLIKFKEEKKNYELVYEVDESISDVLNSTVVDIKSFADSVTISKTSVFPINQLFVTGSTDVVQKLKSLNLSVYVQTFSNEFVSQAWDFFSDATVEINSYVMGAEIDGVVTDFPKTSARYKKNRCLTMKETPSYMSPAQPGALLQLVTPEYLPPKEAPNPVLDDKDVTEPPLPPTSVKAPPPAGEGGSAAAPSTRPNGQPKLGAGSGFLLLNLAILSIALLPF | 771 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 77569017 | 77576568 | - | Hsped.01g12340.1 | Hepe01g1234 | 560344 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe01g1234 | 771 | MobiDBLite | consensus disorder prediction | 702 | 751 | - | - | |
| Hepe01g1234 | 771 | FunFam | Glycerophosphodiester phosphodiesterase GDPDL3 | 48 | 350 | - | - | |
| Hepe01g1234 | 771 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 48 | 348 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Hepe01g1234 | 771 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 365 | 668 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Hepe01g1234 | 771 | PANTHER | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE | 17 | 730 | - | GO:0008889(PANTHER) | |
| Hepe01g1234 | 771 | SUPERFAMILY | PLC-like phosphodiesterases | 48 | 347 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Hepe01g1234 | 771 | Pfam | Glycerophosphoryl diester phosphodiesterase family | 85 | 344 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Hepe01g1234 | 771 | Pfam | Glycerophosphoryl diester phosphodiesterase family | 374 | 664 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Hepe01g1234 | 771 | ProSiteProfiles | GP-PDE domain profile. | 50 | 351 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Hepe01g1234 | 771 | FunFam | Glycerophosphodiester phosphodiesterase GDPDL3 | 365 | 669 | - | - | |
| Hepe01g1234 | 771 | SUPERFAMILY | PLC-like phosphodiesterases | 366 | 668 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Hepe01g1234 | 771 | CDD | GDPD_SHV3_repeat_1 | 50 | 350 | - | - | |
| Hepe01g1234 | 771 | CDD | GDPD_SHV3_repeat_2 | 367 | 668 | - | - | |
| Hepe01g1234 | 771 | ProSiteProfiles | GP-PDE domain profile. | 367 | 669 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe01g1234 | Hepe-Chr1:77569017 | Hepe04g1485 | Hepe-Chr4:70491422 | 1.43e-189 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe01g1234 | - | - | - | 0.0 |