Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1245 ATGGCATATACTTTGGAATCATGGACGAAGGAATACAATGAAGCTTTGAAACTCTCTGAAGATGTCAATGCCATGATTTCTGAGAGAAGTTCACTTGCTGCATCTGGACCGGAGGCTCAACGACATGGCTCGGCTATTCGCAGGAAGATCACAATATTGGGTACCAGACTTGATACCTTGCAGAATCAGTTACCCAAGCTTCAAGGAAAACAACCAATACCAGAGAAAGAGATGAATCGCCGCAGGGACATGATTGCGAATTTGAGAACAAAAGCTAACCAGATGGCTTCAACTTTGAACATGTCGAACTTTGCGAACCGTGATAGCTTACTCGGTCCAGAAATAAAGCAAGCTGATGTTACAAACAGAACAGCAGGCTTGGACAACCAGGGCCTTGTTGGTTTTCAACGACAGATTATGAGAGAGCAAGATGAAGGCCTCGAGAAACTGGAAGGGACTATAATTAGCACAAAACATATTGCAATGGCTGTCAATGAAGAACTTACCCTTCACACGAGACTTATTGATGATTTGGATGAACATGTCGATGTTACAGATTCACGATTACGGCGAGTGCAGAAGAGGCTGGCAATATTGAACAAGCGGACCAAGGGTGGTTGCACTTGCATGTCGATGATTTTATCAGTTGTTGGGATTGTCGTTCTTGTCGCTGTTATATGGCTACTCATCAAGTATTTGTAA 702 43.3 MAYTLESWTKEYNEALKLSEDVNAMISERSSLAASGPEAQRHGSAIRRKITILGTRLDTLQNQLPKLQGKQPIPEKEMNRRRDMIANLRTKANQMASTLNMSNFANRDSLLGPEIKQADVTNRTAGLDNQGLVGFQRQIMREQDEGLEKLEGTIISTKHIAMAVNEELTLHTRLIDDLDEHVDVTDSRLRRVQKRLAILNKRTKGGCTCMSMILSVVGIVVLVAVIWLLIKYL 233
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 77705627 77708250 - Hsped.01g12450.1 Hepe01g1245 560355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1245 233 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 137 199 IPR000727 -
Hepe01g1245 233 SMART tSNARE_6 132 199 IPR000727 -
Hepe01g1245 233 CDD SNARE_Qc 140 197 - -
Hepe01g1245 233 Pfam SNARE domain 174 224 IPR000727 -
Hepe01g1245 233 Gene3D - 139 201 - -
Hepe01g1245 233 SUPERFAMILY SNARE fusion complex 128 199 - -
Hepe01g1245 233 FunFam syntaxin-51 isoform X2 139 201 - -
Hepe01g1245 233 PANTHER SYNTAXIN 11 216 IPR045242 GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1245 K08503 - csv:101208669 403.675