Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe01g1260 | ATGGACTGGACCAGAGGCCCCGCCCTCGGCCGCGGCTCCTCCGCCACCGTCTATTTAGCCACAACCACCTCCTCCGGCCACCAATTCGCCGTCAAAACCACCGACCTCTCTTCATCGGCCTTCTTGCAGAAGGAACACACTCTTCTCTCCAATTTGAACTCTCCATACCTAATCAACTGCTTAGGTTTCGATGTCGAAATTCAAACCTCCAGACCGCCGGTGTTCAATCTATTCATGGAGTATTTGCCGGAGGGTACGCTGTGGGATGCGATTCAGAGCCACGGCGGCCGGATGGACGAATCGACGATCGGAGCGTATTCGCGCCAGATTCTCAAAGGATTGGACTACCTTCACGCTAATGGATTGGCGCATTGCGATATCAAGAGCCGGAATCTGTTATTGAGTGGTGACGGTGAGTGTTTGAAAATCGCCGATCTTGGTTGTGCGAAATTTGTGGATGGAAATGGAGTTGGGGCTTTTTCTGGTTCGCCGGCGTTCATGGCGCCGGAGGTTGCCAGAGGTGAAGAACAGGGGTTTCCGGCGGATGTTTGGGCGTTTGGATGTACGGTCATTGAAATGGCTACCGGCGATCATCCGTGGCCGGAGATGGAGGATCCAGTGTCGGCGTTGTATAGAATTGGGTTTTCCGGCGAGTCGCCGGAGGTTCCGCAGTGGTTGTCGGAGAGGGCGAGGGATTTTGTCCGCAAGTGTTTGATAAAAGACCCGAAAGAACGATGGAGTGCGAAACGGCTTCTTGAGCATCCGTTTCTTCAGGGATTAGACTCTGAATCGGAAATCGAATGCTCGAGGATGAAGACGACGAGTTCTTCTCCAAGCTGTGTTTTGGATCAGAGCTTTTGGGATTCAATGGAAGATTTGCAGACTCCATTGAAGGTCACCCATCAAGCTTCTTCGGCGGATTCTCCGGCTGAGAGGATTAGAAGTTTGGCTGGAAATTTGTCTTCCGATTGCGATTGGGTTTGGGAAGGGGATGATCGAGAATGGGTCTTGATCAGAAACAATGGCGTCGGCGGTGGAAGCCATGGAAATGGATCTGTGAGCTCTGATTTTTCTGCTACAATTGAAGAAGAAGAAGAAGAGATGGAAAATTTGAATTTAGAATTTGAAGAAGATTTTGTGTTATTATATTTGGGTGATGATGATTTTAGTATTGTGAACAATGGGAGAGAAGGATTAGAAATAGAATTTGAGAGTGAATCTATGTTGAAAACTATGAAATTTGAAGCTAATGAGTATTATTTTTCTTCATTAATGCAAATTGATCTTTTGTTGCCTCATGATCTTCTTCTTCTCATCACTTTGTTCAAGAATTATAGTTTGATCAAAGAAGTTTTTGTAAGCCAATTTACTTGCACAATCACAACTCACAATTCACAACAACATTTTAATCTTTCACTTTAA | 1422 | 46.34 | MDWTRGPALGRGSSATVYLATTTSSGHQFAVKTTDLSSSAFLQKEHTLLSNLNSPYLINCLGFDVEIQTSRPPVFNLFMEYLPEGTLWDAIQSHGGRMDESTIGAYSRQILKGLDYLHANGLAHCDIKSRNLLLSGDGECLKIADLGCAKFVDGNGVGAFSGSPAFMAPEVARGEEQGFPADVWAFGCTVIEMATGDHPWPEMEDPVSALYRIGFSGESPEVPQWLSERARDFVRKCLIKDPKERWSAKRLLEHPFLQGLDSESEIECSRMKTTSSSPSCVLDQSFWDSMEDLQTPLKVTHQASSADSPAERIRSLAGNLSSDCDWVWEGDDREWVLIRNNGVGGGSHGNGSVSSDFSATIEEEEEEMENLNLEFEEDFVLLYLGDDDFSIVNNGREGLEIEFESESMLKTMKFEANEYYFSSLMQIDLLLPHDLLLLITLFKNYSLIKEVFVSQFTCTITTHNSQQHFNLSL | 473 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 77888707 | 77890147 | + | Hsped.01g12600.1 | Hepe01g1260 | 560370 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe01g1260 | 473 | SMART | serkin_6 | 3 | 257 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe01g1260 | 473 | CDD | STKc_MAPKKK | 2 | 257 | - | - | |
Hepe01g1260 | 473 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 2 | 258 | IPR052751 | GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
Hepe01g1260 | 473 | ProSitePatterns | Protein kinases ATP-binding region signature. | 9 | 32 | IPR017441 | GO:0005524(InterPro) | |
Hepe01g1260 | 473 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 316 | - | - | |
Hepe01g1260 | 473 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 305 | IPR011009 | - | |
Hepe01g1260 | 473 | ProSiteProfiles | Protein kinase domain profile. | 3 | 257 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe01g1260 | 473 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 122 | 134 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe01g1260 | 473 | Pfam | Protein kinase domain | 5 | 257 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe01g1260 | 473 | Coils | Coil | 354 | 381 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g1260 | Hepe-Chr1:77888707 | Hepe08g0454 | Hepe-Chr8:3987877 | 6.30e-103 | dispersed | |
Hepe10g1336 | Hepe-Chr10:49487216 | Hepe01g1260 | Hepe-Chr1:77888707 | 8.82e-64 | transposed | |
Hepe01g1260 | Hepe-Chr1:77888707 | Hepe04g1749 | Hepe-Chr4:72521792 | 1.38e-94 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72460 | PF00069 | Pkinase | 1.80E-54 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe01g1260 | K20716 | - | csv:101205426 | 629.402 |