Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1268 ATGCCATCGGCTCAAGATCCGTTCTATGTTGTAAAAGACGAGATTCAAGAATCTATTGATAAACTGCAATCCAGCTTTCACCAATGGGAAAGGATATCTTCTGATCCAGGAGAGAGAGTACAACTCACAAAAGAGTTGCTCGCTTCCTGTGAGAGCATTGAATGGCAGGTGGATGAATTGGACAAAGCTATTGCTGTGGCAGCTAGAGATCCTTCTTGGTATGGCATTGATAATGCAGAAATTGAAAAACGAAGGAGATGGACGAGTACAGCTAGGACACAGGTTGGAAAGGTTAAGAAAGTAGTGGGAGCTGGAAAGGAGCAAATTGGAACTGCTAGTGCGAATGGGATGCGTCGAGAATTGATGAGACTACCTAATGCACACGAAACAGACAGATCAAACTTATATACAGCCCACCAAGGAAATGATGACTTCATCACGTCCGAATCAGATAGACAGCTGCTTCTCATAAAGCAGCAGGACGAGGAGTTGGATGAGCTGAGTGCAAGCGTGGAGAGAATTGGCGGTGTTGGGCTTACAATACATGAAGAGCTCCTTGCACAGGATAAAATTATCGTGGACCTAGGAATGGAAATGGACAGTACATCAAATCGTCTTGATTTTGTTCAGAAAAAAGTGGCTGTGGTAATGAAGAAGGCCAGCGCCAAGGGCCAGTTAATGATGATATTGTTTTTGTTGGCTTTGTTCATCATCCTTTTTGTGTTGGTGTTCCTCACCTAG 741 43.86 MPSAQDPFYVVKDEIQESIDKLQSSFHQWERISSDPGERVQLTKELLASCESIEWQVDELDKAIAVAARDPSWYGIDNAEIEKRRRWTSTARTQVGKVKKVVGAGKEQIGTASANGMRRELMRLPNAHETDRSNLYTAHQGNDDFITSESDRQLLLIKQQDEELDELSASVERIGGVGLTIHEELLAQDKIIVDLGMEMDSTSNRLDFVQKKVAVVMKKASAKGQLMMILFLLALFIILFVLVFLT 246
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 77971899 77978347 + Hsped.01g12680.1 Hepe01g1268 560378
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1268 246 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 154 216 IPR000727 -
Hepe01g1268 246 FunFam Syntaxin 10 3 105 - -
Hepe01g1268 246 Gene3D - 2 104 - -
Hepe01g1268 246 PANTHER SYNTAXIN 11 232 IPR045242 GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER)
Hepe01g1268 246 SMART tSNARE_6 149 216 IPR000727 -
Hepe01g1268 246 CDD SNARE_NTD_AtSYP61-like 5 102 - -
Hepe01g1268 246 CDD SNARE_Qc 157 214 - -
Hepe01g1268 246 SUPERFAMILY t-snare proteins 5 100 IPR010989 GO:0016020(InterPro)|GO:0016192(InterPro)
Hepe01g1268 246 SUPERFAMILY SNARE fusion complex 153 216 - -
Hepe01g1268 246 FunFam syntaxin-61 isoform X1 157 218 - -
Hepe01g1268 246 Pfam SNARE domain 194 242 IPR000727 -
Hepe01g1268 246 Pfam Syntaxin 6, N-terminal 6 99 IPR015260 GO:0016020(InterPro)|GO:0048193(InterPro)
Hepe01g1268 246 Gene3D - 161 225 - -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1268 K08500 - csv:101212527 403.675