Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1272 ATGGTTGATTTAGACTTCGAAATCCCATCTGCTTTTGATCCATTCGCTGACGCCAAGGATTCTGATGCCACCGGAACAAAAGAGTATGTTCATATCCGCGTCCAGCAGAGGAATGGTAGAAAGTGCTTGACTACAGTTCAGGGTCTCAAGAAAGACTTGAGCTACGAGAAGATCCTCAAAGAGGTCAAGAAGAGTTTCTGCTGTAATGGTAATGTTGTCCAAGACAAAGATTTGGGGAAGGTAATTCAACTTCAGGGCGATCAGCGCAAGAACGTCTCTCAATTCCTTGTTCAGGCTGGACTTGTCAAGAAGGATCAGATCAAGATTCATGGCTTTTGA 339 44.25 MVDLDFEIPSAFDPFADAKDSDATGTKEYVHIRVQQRNGRKCLTTVQGLKKDLSYEKILKEVKKSFCCNGNVVQDKDLGKVIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 77992758 77993096 + Hsped.01g12720.1 Hepe01g1272 560382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1272 112 SUPERFAMILY eIF1-like 4 112 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Hepe01g1272 112 Pfam Translation initiation factor SUI1 27 101 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Hepe01g1272 112 NCBIfam translation initiation factor SUI1 7 112 IPR005874 GO:0003743(InterPro)
Hepe01g1272 112 FunFam Eukaryotic translation initiation factor SUI1 2 112 - -
Hepe01g1272 112 PIRSF Transl_init_SUI1_Euk 2 112 IPR005874 GO:0003743(InterPro)
Hepe01g1272 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 112 - GO:0003723(PANTHER)
Hepe01g1272 112 Gene3D - 3 112 - -
Hepe01g1272 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Hepe01g1272 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1272 Hepe-Chr1:77992758 Hepe01g1530 Hepe-Chr1:80535841 2.02e-73 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1272 K03113 - csv:101202908 213.772