Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1276 ATGTATGTCAGGTATGTTATGGACCACGATAAACTCAAGGCTACTGAGCTAAGACAGGTCATAGCTGCAACAGTAGCTAGTGATCCAACAAGGTATTCTGAAGCATTTCTTGGAAAGCCAAATGAGGAGTACTGTGCTTGGATTCTTGATTCAGAGAAGTGGGGAGGTGCCATTGAGCTTTCGATATTATCCGAATATTATGGGCGTGAAATTGCAGCATACGATATCCAGACCACACGATGTGATTTGTATGGTCAGGAAAAGAAGTATTCGGAAAGGGTTCTGCTGATATATGATGGACTCCACTATGATGCTTTAGTTATGTCTCCATCGGAGGGAGCTCCAGAGGAATTTGATCAGACCATATTTTCTATAAATAGGGACAGGACAATTGGGCCCATTGAGGAGCAAGCTCTTCATTTTGCTAAAGAGCAGCATAGGAAAAGGAGATTCACCGACACCGCCAACTTCACTCTGCGCTGTGGGGTTTGCCAAATTGGAGTCATTGGCCAAGCGGAGGCTGTAGAACACGCAAAAGCGACGGGTCATGTCAACTTTCAAGAGTATAGATGA 573 44.5 MYVRYVMDHDKLKATELRQVIAATVASDPTRYSEAFLGKPNEEYCAWILDSEKWGGAIELSILSEYYGREIAAYDIQTTRCDLYGQEKKYSERVLLIYDGLHYDALVMSPSEGAPEEFDQTIFSINRDRTIGPIEEQALHFAKEQHRKRRFTDTANFTLRCGVCQIGVIGQAEAVEHAKATGHVNFQEYR 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 78010804 78013762 + Hsped.01g12760.1 Hepe01g1276 560386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1276 190 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 4 188 - GO:0004843(PANTHER)|GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0016579(PANTHER)|GO:0030433(PANTHER)|GO:0030968(PANTHER)
Hepe01g1276 190 SUPERFAMILY Cysteine proteinases 9 107 IPR038765 -
Hepe01g1276 190 Gene3D - 2 155 - -
Hepe01g1276 190 Pfam OTU-like cysteine protease 9 89 IPR003323 -
Hepe01g1276 190 FunFam ubiquitin thioesterase OTU1 2 155 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1276 K13719 - csv:101222942 368.622