Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1296 ATGATCTGCGTTGTGAAACAATCTGCTAGGGTTATCAATTGCTCTGATGGTGTTATTCGGAGCAAAATCTCGGTTCCCTCTCAGCGATCCTCGTTTCTTCCTCCACTTCCGGTGCAAAAATCTCGAAATTCCACTGTTTCTGTTCATAAGGCTGTACATGTTTCTTCGCTTGAGAATTTTGGATCACTTGGGGTTCGTAAACCTAATTTGATCAAATGCGAAGCTTACGAGGCTGAGCGATCGCAGCCGATCGAATCGAGCATTGAGTTGCCGCAGAGTCAGGTCCCTTCCGAGGCTGCGAAGAAGGTCAGAATTGGATCTTACTTCGCTATTTGGTGGGCTTTGAACGTTGTTTTCAATATCTACAACAAGAAGGTTTTGAACGCGTACCCGTATCCATGGCTGACCTCAACTCTGTCGCTTGCTGCTGGATCTCTGATCATGTTGATCTCATGGATGACGAGAATTGCCGAGACGCCGAAAACCGATGTCGAGTTTTGGAAGTCGTTGTTCCCTGTTGCTGTTGCCCATACAATTGGACATGTTGCTGCAACCGTGAGCATGTCAAAGGTTGCAGTTTCATTCACTCACATCATCAAGAGTGGTGAACCTGCTTTTAGCGTATTGGTTTCGAGGTTCTTGTTGGGTGAGACCTTTCCGCTTTCTGTCTACTTGTCGCTCCTCCCAATCATCGGTGGGTGTGCTCTTGCTGCTGTGACCGAGCTCAACTTTAACATGACGGGTTTCATGGGTGCCATGATATCAAACTTGGCATTTGTATTCCGTAACATCTTTTCGAAGAGGGGCATGAAGGGAAAATCTGTTAGCGGGATGAACTACTATGCGTGTTTATCAATTTTGTCTCTGTTAATCCTGACACCGTTTGCATTTGCTGTGGAGGGACCACAAGTGTGGGCTGCTGGATGGCAAACAGCAGTCTCTCAAATTGGACCTCATTTTGTTTGGTGGGTTGCAGCGCAAAGTATATTCTATCATCTCTATAACCAGGTGTCTTACATGTCTTTGGATGAGATTTCTCCCTTGACGTTTAGCGTTGGAAACACCATGAAACGTATATCAGTCATAGTTTCTTCCATCATCATCTTCCGCACGCCTGTGCAGCCAGTCAACGCGCTCGGAGCTGCCATTGCAGTTCTCGGAACCTTCATATATTCGCAGGCAAAGCAATGA 1191 46.43 MICVVKQSARVINCSDGVIRSKISVPSQRSSFLPPLPVQKSRNSTVSVHKAVHVSSLENFGSLGVRKPNLIKCEAYEAERSQPIESSIELPQSQVPSEAAKKVRIGSYFAIWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLIMLISWMTRIAETPKTDVEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLSVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSILSLLILTPFAFAVEGPQVWAAGWQTAVSQIGPHFVWWVAAQSIFYHLYNQVSYMSLDEISPLTFSVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAVLGTFIYSQAKQ 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 78162253 78166462 - Hsped.01g12960.1 Hepe01g1296 560406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1296 396 PANTHER SOLUTE CARRIER FAMILY 35 99 395 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
Hepe01g1296 396 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 104 395 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Hepe01g1296 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 239 - -
Hepe01g1296 396 Pfam Triose-phosphate Transporter family 104 392 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1296 Hepe-Chr1:78162253 Hepe05g1847 Hepe-Chr5:68785154 2.03e-105 dispersed
Hepe04g1877 Hepe-Chr4:73714964 Hepe01g1296 Hepe-Chr1:78162253 6.00e-71 transposed
Hepe01g1296 Hepe-Chr1:78162253 Hepe04g1780 Hepe-Chr4:72701020 3.85e-189 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1296 K15283 - csv:101220046 729.169