Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1303 ATGTTTGATGAAGAGACTAACTCTGATTTGAAGTTAATAACATTCCCACCATTTTTATATATAGGCAAAAGCTACATTCACGTATGCTGCAAGAAAGACCCCAAATTCAAGCTAAAACCAGCAAAGAAGACGAAGTTCTTCCCGAGACAGAACGGCGATCTCTCGCTCACCTACGATGTCCTCCAAGCTTATGGCAACAACTATCTCGCACAAGTCACCATCGACAACATCAACCCTCTAGGCCGACTCGACCATTGGAACTTAACATGGGAATGGACTAGAGGAGAATTTATTTCCACAATGCGTGGAGCTTACACTCGCAAATCTGACCATTCTACCTGCATCTTTGGCCCTGTGGGCCAATCTTATCAAGATCTCGACTTCTCGCACATCATGAACTGCGAGAAGAACCCTGTCATCGCCGACCTCCCCACCGATCGAGCCAACGATTCCAAAGTCGGAAAGTTACCGTTTTGCTGCAAAAATGGCACCATCTTACCGGCATTGATGGATCAAACCAAAGCAAGGTCTATTTTCCAACTTCAAGTCTATAAGCTTCCCCCTGACTTCAACATAACAGCCTTGTACCCTCCTCAAAAATGGAACATCAAAGGCATTCTTAACCCCAATTACAAATGTGGACTTCTCATTAGAGTGGATCCAACACTATTTCCTGACCCAAATGGCCTTCAAGCCACAAGCACTTCCATTGCAAGTTGGCAAGTGGTTTGCAACATCACAGTTCCCAAACCCAAACAATCTAGATGTTGTGTTTCCTTCTCTGCTTATTACAATGACTCTGTTATCCCTTGCAGCACTTGTGCTTGTGGGTGTGATCAAACTGATCAATCTTGCAACCCAAGTTCTTCCCCAATGCTGCTTCCCCCAGAAGCACTTTTGGTTCCATTTGACAATAGGACTCTAAAGGCAAAAGCTTGGGCCAAAATCAAACACTTTCCCATCCCCAAAAGGCTCCCCTGCCCAGACAATTGTGGGGTTAGTTTGAATTGGCATATAAACTCAGATTATAGCAGCGGTTGGACTGCAAGAATCACTCTTTTCAATTGGGAAGAATACCCTTTTGAGGATTGGTTTGCTGCTGTTCAATTGAACTCGAAAGCTGCTAAAGGCTATGAAGATACTTATTCCTTCAATGGGACTAAACTCTCACTAGATTTGATCAAGAACACAATCTTGTTCCAAGGATTGGAGGGTTTGAATTACCTTATGGGGGAGATGAATGGGACGGACCCGAGATTCGATCCGCGAGTACCGGGAAAGCAGCAATCGGTGATCTCGTTCACTAAGAAGAACTTGAGAAACTTCAATATAAGGGAAGGAGATGGATTTCCTTCAAAGGTGTATTTCAATGGACAAGAATGTGCACTTCCTCCTCACATTCCTTTGGGAAATGGTGCTGCTCATAGCCTCCAACCTCAAGTGCTTCTGCTCACAGTTGTGGCCTTTTTCATTCTCTTCACTGATGGCTTTCATTGA 1497 44.22 MFDEETNSDLKLITFPPFLYIGKSYIHVCCKKDPKFKLKPAKKTKFFPRQNGDLSLTYDVLQAYGNNYLAQVTIDNINPLGRLDHWNLTWEWTRGEFISTMRGAYTRKSDHSTCIFGPVGQSYQDLDFSHIMNCEKNPVIADLPTDRANDSKVGKLPFCCKNGTILPALMDQTKARSIFQLQVYKLPPDFNITALYPPQKWNIKGILNPNYKCGLLIRVDPTLFPDPNGLQATSTSIASWQVVCNITVPKPKQSRCCVSFSAYYNDSVIPCSTCACGCDQTDQSCNPSSSPMLLPPEALLVPFDNRTLKAKAWAKIKHFPIPKRLPCPDNCGVSLNWHINSDYSSGWTARITLFNWEEYPFEDWFAAVQLNSKAAKGYEDTYSFNGTKLSLDLIKNTILFQGLEGLNYLMGEMNGTDPRFDPRVPGKQQSVISFTKKNLRNFNIREGDGFPSKVYFNGQECALPPHIPLGNGAAHSLQPQVLLLTVVAFFILFTDGFH 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 78236816 78238838 - Hsped.01g13030.1 Hepe01g1303 560413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1303 498 Pfam COBRA-like protein 68 247 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Hepe01g1303 498 PIRSF COBRA 24 496 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Hepe01g1303 498 PANTHER COBRA-LIKE PROTEIN 7 22 491 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1303 Hepe-Chr1:78236816 Hepe07g1196 Hepe-Chr7:28357473 4.88e-264 dispersed
Hepe01g1303 Hepe-Chr1:78236816 Hepe02g0921 Hepe-Chr2:11095838 6.22e-40 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1303 - - - 0.0