Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe01g1311 | ATGGTATCCCCCGAAAATCCCAATTGGTTGTTTGATTATGGTTTGATTGACGATATCCCTGTACCTGAAGCGAATTTCCCAGTCACGAGTTCAAGCTTCTCGTGGGCTGTTCAGCCCTTTAACGGCACCCCAGATGCTGGTGCGGAAATTGATGGTTCATTGGCAGATCTGGATGGCCATCTAGAATCTGGCTCAAAGAAGAGGGTCAGATCTGATTCATGTAGTGGATCAAGCTCCAAAGCATGTAGGGAGAAATTGCGGAGAGATAGGCTCAATGACAAGTTTCTTGAACTGGGCTCCATTCTGGATCCTGGAAGACCACCCAAAACCGACAAGGCTGCAATTTTAGTTGATGCTGTTCGAATGGTGAATCAGTTGCGTAGCGAAGCCCAGAAACTGAAGGAATCAAATTCAGGTCTCCAGGAGAAGATCAAAGAGTTGAAGACCGAGAAGAATGAGCTTCGCGACGAGAAGCAGAGGCTGAAGGCAGATAAGGAGAAGCTAGAGCAGCAAGTGAAGTCCATGCATGCTCAACCAGCTGGCTTCTTACCTCCACCAATGCCCACATTTGCTGCTCAGGGTCAAGCTCCTGGAAATAAGTTAGTTCCTTTCATTGGTTACCATCCGGGAGTTGCCATGTGGCAGTTCATGCCGCCTGCTGCGGTGGACACGTCACAGGACCATGTGCTCCGGCCACCCGTCGCTTAA | 708 | 49.44 | MVSPENPNWLFDYGLIDDIPVPEANFPVTSSSFSWAVQPFNGTPDAGAEIDGSLADLDGHLESGSKKRVRSDSCSGSSSKACREKLRRDRLNDKFLELGSILDPGRPPKTDKAAILVDAVRMVNQLRSEAQKLKESNSGLQEKIKELKTEKNELRDEKQRLKADKEKLEQQVKSMHAQPAGFLPPPMPTFAAQGQAPGNKLVPFIGYHPGVAMWQFMPPAAVDTSQDHVLRPPVA | 235 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 78330567 | 78333251 | - | Hsped.01g13110.1 | Hepe01g1311 | 560421 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe01g1311 | 235 | FunFam | Transcription factor bHLH34 | 66 | 124 | - | - | |
Hepe01g1311 | 235 | Pfam | Helix-loop-helix DNA-binding domain | 79 | 127 | IPR011598 | GO:0046983(InterPro) | |
Hepe01g1311 | 235 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 75 | 126 | IPR011598 | GO:0046983(InterPro) | |
Hepe01g1311 | 235 | CDD | bHLH_AtILR3_like | 80 | 155 | - | - | |
Hepe01g1311 | 235 | PANTHER | BHLH TRANSCRIPTION FACTOR | 8 | 235 | IPR044818 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0006879(InterPro)|GO:0046983(InterPro) | |
Hepe01g1311 | 235 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 80 | 152 | IPR036638 | GO:0046983(InterPro) | |
Hepe01g1311 | 235 | SMART | finulus | 81 | 132 | IPR011598 | GO:0046983(InterPro) | |
Hepe01g1311 | 235 | Coils | Coil | 116 | 178 | - | - | |
Hepe01g1311 | 235 | Gene3D | arf6 gtpase in complex with a specific effector, jip4 | 125 | 179 | - | - | |
Hepe01g1311 | 235 | Gene3D | - | 66 | 124 | IPR036638 | GO:0046983(InterPro) | |
Hepe01g1311 | 235 | MobiDBLite | consensus disorder prediction | 163 | 194 | - | - | |
Hepe01g1311 | 235 | MobiDBLite | consensus disorder prediction | 55 | 83 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g1311 | Hepe-Chr1:78330567 | Hepe04g1592 | Hepe-Chr4:71405335 | 2.65e-11 | dispersed | |
Hepe05g1646 | Hepe-Chr5:66308257 | Hepe01g1311 | Hepe-Chr1:78330567 | 3.14e-37 | transposed | |
Hepe07g1156 | Hepe-Chr7:25726839 | Hepe01g1311 | Hepe-Chr1:78330567 | 6.09e-88 | transposed | |
Hepe08g1394 | Hepe-Chr8:16413391 | Hepe01g1311 | Hepe-Chr1:78330567 | 5.06e-41 | transposed | |
Hepe01g1311 | Hepe-Chr1:78330567 | Hepe07g1992 | Hepe-Chr7:63950339 | 1.79e-62 | wgd | |
Hepe01g1311 | Hepe-Chr1:78330567 | Hepe08g0487 | Hepe-Chr8:4274991 | 1.26e-60 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54820 | PF00010 | HLH | 1.10E-09 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe01g1311 | - | - | - | 0.0 |