Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1317 ATGCCAAAAGTTTGGTTTTCTTTGAAAAAATCCTTCCCTTGCAAACCAGAGCCATCAGAAGTCTATGATCCAAAGTGCAGGAAACAACTCAACACAATCACAACTAAGAAAGCAGCCAAAAAGTCAGGTTGTTCTTCTGGAAGGTCTGGCTGTTCAAGGTCCATAGCAAATCTCAAAGATGTCATCCATGGAAGCAAGAGGCACATGGAAAAACCGCCAATTTGCAGCCCGAGGTCCATCGGTAGCAGCGAGTTCCTCAACCCGATTGCTCATGAAGTAATACTCAGCAACTCAAAGTGTGAGCTCAAGATCACTGGTTTTGGAGGCTTCCACCAAGAGGGTGTGGGAAATGCTGGCTTTGGCGGGGGAGGGGGCGGGGGCGGGAATTCGCCATTTTTCGGTACTCTAAGGCCCGGAACGCCCGGTCCAGGGGAGCACTTTGTTAACAACTCCAATTCTCCTTTTAGTACTACTTCCATATCTGCTGCAAGAAAGGTTCCTTCTCTTTTATCATATAGAGATGGTTCTGCAGCTGGAAGTACTGCTAAATCTAGGGGGGGTGGGGAAGTTCATACAAGCAAAAGGTTCTCCCCGCTTACCGAATCTAACCGTAATACGTTTTCGGCAGTTACGTGCCATAAATGTGGAGAGCAGTTCTGCAAATTGGAGGCTGCTGAGTCTCACCATCTCTCCAAGCATGCTGTTACCGAACTTGTGGAAGGCGATTCATCGAGGAAAATCGTCGAAATAATATGTCGAACGAACTTGTTGAAGTCGGAGAACAATGGCAACCGAATTGAAAGAGTTTTCAAAGTTCACAATATGCAGAAAACATTAGCTGGATTTGAAGAATACAGGGAAATGGTGAAGATCAAGGCGAGCAAGCTTTCGAAGAAACACCCTCGATGCCTCGCCGATGGGAACGAGCTACTGAGGTTTTACGGGACAACGTTAGCCTGCTCTCTTGGAGTAAATGGCTCCTCCAGCCTCTGCATATCACAGAAATGCAGTGTCTGCAGAATCATAAGGAATGGTTTCTCAGCAAAGAAGGATATGAAAGAAGTAGGAGTTTTCACGACTTCGACGAGCGGAAAAGCTTTCGAAACCATTGAAACGACAGAAGAAATCTCGGTAAAGAAAGCATTGATAATATGCAGAGTGATTGCAGGGAGGGTTCATAGGCCTTTGGAGAATATACAAGATATGGTTGGCCAAGCAGGGTTTGATTCTTTGGCTGGCAAAGTGGGATTACATTCCAACATTGAAGAGCTTTATTTGCTCAATCCTAGAGCTTTGCTTCCTTGTTTTGTTGTAATTTGCAAACCATGA 1329 45.45 MPKVWFSLKKSFPCKPEPSEVYDPKCRKQLNTITTKKAAKKSGCSSGRSGCSRSIANLKDVIHGSKRHMEKPPICSPRSIGSSEFLNPIAHEVILSNSKCELKITGFGGFHQEGVGNAGFGGGGGGGGNSPFFGTLRPGTPGPGEHFVNNSNSPFSTTSISAARKVPSLLSYRDGSAAGSTAKSRGGGEVHTSKRFSPLTESNRNTFSAVTCHKCGEQFCKLEAAESHHLSKHAVTELVEGDSSRKIVEIICRTNLLKSENNGNRIERVFKVHNMQKTLAGFEEYREMVKIKASKLSKKHPRCLADGNELLRFYGTTLACSLGVNGSSSLCISQKCSVCRIIRNGFSAKKDMKEVGVFTTSTSGKAFETIETTEEISVKKALIICRVIAGRVHRPLENIQDMVGQAGFDSLAGKVGLHSNIEELYLLNPRALLPCFVVICKP 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 78378817 78380455 + Hsped.01g13170.1 Hepe01g1317 560427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1317 442 FunFam C2H2-like zinc finger protein 234 441 - -
Hepe01g1317 442 MobiDBLite consensus disorder prediction 176 195 - -
Hepe01g1317 442 SUPERFAMILY ADP-ribosylation 235 441 - -
Hepe01g1317 442 ProSitePatterns Zinc finger C2H2 type domain signature. 212 233 IPR013087 -
Hepe01g1317 442 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 441 - -
Hepe01g1317 442 Gene3D - 240 441 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1317 Hepe-Chr1:78378817 Hepe07g1343 Hepe-Chr7:44107672 7.25e-72 dispersed
Hepe01g1317 Hepe-Chr1:78378817 Hepe04g1795 Hepe-Chr4:72878533 4.40e-70 wgd
Hepe01g1317 Hepe-Chr1:78378817 Hepe07g1110 Hepe-Chr7:19100442 2.30e-203 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1317 - - - 0.0