Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1320 ATGGACTCTCATCAACTGTTTGGATTTGAGGTTAATAGTGCAGGGCTTTCATATACATCTTTACCTAATAGTTTGCTTGGACCCTTGAAATTTAACCTAGGGAATTCCCCGGCGTCGTTTTTCTCGTCGCATTTTGAATTGGATTCGTTTACTACGACGGCTGTGAGTGATAGTCCGGATCAGAGAAACTCCCCTGAGAATTTCTCTGGACTTAGCCCTTCTTGTAATTCGTCTAGCTTTAATCAAATTGCGTCGTCGTCGTATTTGGATCATTGTGAGGACGAGAGTCGAAGAATCTATTCGGGGTTGAATGCAGTTGTTTACGATGGATGCTCGACCGAGAACATGAGGTACACGTTGAAACAATTGGAGAGTGCTCTTATGGGGCCGGATAATGAGGAAGTTGTGAGCAAGCCTGATGATGCTTCGACGTTTGGAGAGAGTAGCAGGCCACAGAGGATGGGGGAGAGGTCGTACTCGTGGAGCCAAGATCGACGGGGTGGGTCGTACGTTGTCCAGTCTCAGACGTCGTTGCCGGTGTCGAGAAGCCAGGAATCCGAAGGAGTTCACTTGGTGAAACGGCAGAAATCGATGGATGAATCGATGTTGCAGCAGCAGGGTGGATCTCCATCGGATAATTTGAAGGAGTTGCTGATTGCTTGTGCAAAAGCTTTAGCTGAAAACAGGATGGAGGATTTTGATAACTTGGTAGCCACAGCAAGAGGCGCGGTGTCTATCAGCGGAGAACCGATGCAGCGTCTGGGCGCTTACATGGTGGAAGGGTTGGTGGCGAGGAAAGAGGAATCGGGGGCGAGTATATACCATGCTCTAAACTGTAGAGAGCCTGCAAGTAATGATTTGCTATCTTATATGCATATGCTATATGAAATCTGCCCCTACTTGAAGTTCGGTTACATGGCAGCGAACGGGGCGATTGCCGAAGCCTGCAGAAACGAAGACCGCATTCACATCATAGACTTCCAGATTACTCAGGGGACGCAGTGGTTAACCCTTCTTCAGGCACTCGCAGCAAGGCCTAGTGGGGCTCCCCATGTGAGGATAACTGGTATCGATGACCCTGTTTCTAAATATGCCCGTGGCGATGGGTTGGAGGTCGTTGAGAGGCGATTGGCCGAAATCTCCAGCAAGTACGGAATATCAGTAGAGTTTCATGGAGTACCCGTTTTCGCTTCAGACATCACGCTTGATATGCTCGACATCAGACCCGGGGAGGCTCTGGCTGTAAACTTCCCATTGCAACTTCATCATACCCCAGACGAAAGCGTTGACGTGAACAATCCACGCGACGGTCTGCTGAGAATGGTGAAGTCGTTATCCCCAAAGGTAGTAACTTTGGTAGAGCAAGAATCAAACACCAACACAACCCCTTTCTTCAACAGGTTTGTGGAAACTTTAGATTACTACTTGGCAATCTTTGAGTCCATTGATGTGACTCTAGCAAGGAACAACAAGAAGCGCATCAATGTGGAGCAACATTGTTTGGCAAAAGATATTGTTAACGTCATCGCTTGCGAGGGGAAGGAACGAGAAGAGCGCCACGAGCTCTTCGGCAAGTGGAAATCGAGGTTGACAATGGCAGGGTTCCGTCAGTCCCCCTTGAGCTCTTACGTCAACTCCGTCATCAGGAGCTTGCTCAGGTGTTATTCGGAGCATTACACACTCGTCGAGAAAGATGGAGCAATGCTGCTGGGATGGAAAAACAGGAACCTGATATCTGCCTCGGCCTGGCTTCGCTCGGAAGCTGCTGCTATCAACCACACCACTGAACTGACTTGGACATTCAAGTTTGATGACTGCTTTGTGTTTATGGATAAGAAGTGTAATTTTGGACATAAGAATCCATTGATTCCCATTGTTTCATAG 1884 48.2 MDSHQLFGFEVNSAGLSYTSLPNSLLGPLKFNLGNSPASFFSSHFELDSFTTTAVSDSPDQRNSPENFSGLSPSCNSSSFNQIASSSYLDHCEDESRRIYSGLNAVVYDGCSTENMRYTLKQLESALMGPDNEEVVSKPDDASTFGESSRPQRMGERSYSWSQDRRGGSYVVQSQTSLPVSRSQESEGVHLVKRQKSMDESMLQQQGGSPSDNLKELLIACAKALAENRMEDFDNLVATARGAVSISGEPMQRLGAYMVEGLVARKEESGASIYHALNCREPASNDLLSYMHMLYEICPYLKFGYMAANGAIAEACRNEDRIHIIDFQITQGTQWLTLLQALAARPSGAPHVRITGIDDPVSKYARGDGLEVVERRLAEISSKYGISVEFHGVPVFASDITLDMLDIRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMVKSLSPKVVTLVEQESNTNTTPFFNRFVETLDYYLAIFESIDVTLARNNKKRINVEQHCLAKDIVNVIACEGKEREERHELFGKWKSRLTMAGFRQSPLSSYVNSVIRSLLRCYSEHYTLVEKDGAMLLGWKNRNLISASAWLRSEAAAINHTTELTWTFKFDDCFVFMDKKCNFGHKNPLIPIVS 627
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 78408881 78411179 + Hsped.01g13200.1 Hepe01g1320 560430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1320 627 ProSiteProfiles GRAS family profile. 205 584 IPR005202 -
Hepe01g1320 627 Pfam GRAS domain family 214 583 IPR005202 -
Hepe01g1320 627 MobiDBLite consensus disorder prediction 142 167 - -
Hepe01g1320 627 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 191 583 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Hepe01g1320 627 MobiDBLite consensus disorder prediction 130 167 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1320 Hepe-Chr1:78408881 Hepe06g0540 Hepe-Chr6:30762455 8.38e-163 dispersed
Hepe01g1320 Hepe-Chr1:78408881 Hepe02g0199 Hepe-Chr2:2036986 5.64e-36 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54821 PF03514 GRAS 3.60E-129 CL0063 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1320 K27748 - csv:101216606 981.859