Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1338 ATGGCAAATCCTCCTCAAATAACCACTCTGTTTCTGTCTCTGTTTCTGTTTCTGTTCTCTTCGCCGTCTCTGGCTGTTGATTTCTTAACACCCTCTCAAAACCTCACCGACGGCGGCGGCGACGCCACTTTAGTCTCGGAAAAGGGGTTTTTCGAACTGGGTTTCTTCAACCCTGGAAATTCCTCAAACCGTTACTTAGGAATTTGGTACAAGATCATCCCAGTTCGCACAGTCGTTTGGGTCGCCAACAGACAAAACCCTATAACCAATTCTTCCGCCGTTTTCAAAATCAACGCTACCACGAGCGCTCCTGTTCTCTTCCAGAACGACGCCGTCGTTTGGTCTGGAGAATCGTTGAAGCCATTGAAAAACCCCAAACTACAGCTCTTGGACAACGGAAATCTGGTGGTGAAAGACGCGGATTCGGACGCGATTTCATGGCAGAGCTTCGATTACCCAACGGACACATTACTCCCCGGAATGAAACTCGGGTGGGACTTCAAGAACGGAATCCACCGCCGTTTATCCGCCTGGAAAACCCCCGACGACCCATCTCCGGGGAGTTTAACGATGGAAATGATGAACACTAGCTACCCAGAACCGGCGATGTGGAACGGCTCGACGGAGTTCATGAGGAGCGGACCATGGAACGGCCTTCAATTCAGCGCGAAACCCACCTCGGCGCTACCGATTTTGGTCTACAGCTACATAAACAACAAATCCGAGCTCACTTACAGCTACGAGCTCATAAACTCCTCGCTAATCGGAAGAATGGTGTTGAATCAAACCGTATTCCGAAGAGAGGCTTTGTTATGGTCGGAATCAGAGAAGATTTGGAAACTGTATGCTACTATGCCGAGGGATTACTGCGATACTTACGGGCTTTGTGGCGCGTTTGGGAGCTGCGATATCGAGCAAATGCCTGCTTGTCAATGTCTAAATGGGTTTCATCCAAAAGTGCAGGAGAAGTGGAATTTGATGGATTATGGTGAAGGGTGTGTGAGAAATCGGCCATTGAATTGCTCTGGTGGTGAGAAAATTGGGTTTAGGAAGCTGCCGGGGCTGAAATTGCCTGATACGAAGCTGTCTTGGGTTAATGAGAGTATGAGTTTGAGTGAGTGTAGAGAGGAGTGTTTGAGGAATTGTTCTTGTGTGGCTTATGCTAATACGGACATTAGGGGAAGTGGGAATGGTTGTGCTATTTGGTTTGAGAAGCTTGTTGATATTAAAGTGGTTCGAAAAGGAGGGCAGGATTTGTATGTTAGAATGTTGGCTTCTGAATTGGAGACGAAGAAGACGACGAGCTCGGTTTTCGTCGGGGCTATCATCGGAGCGGCGGTTCTGGTGATTGCTGGTCTGGTTTTGGTTGGAGTTTACATTGTCAGAAGTAGGAGGAGAAGCTTGGAAGGCAAGGATCTCGAAGGGCAAGGCGACGACTTGGAGCTCCCATTATTCGACTTAACAACAATATCCAATGCCACAAACAATTTTTCAAACTCCAACAAGCTTGGAGAAGGTGGTTTTGGTGCAGTCTTTCGGGGGAGACTCGTAGATGGACATGAAATCGCAGTAAAGAGACTTTCTAGCTATTCGAGACAAGGGACAGATGAATTCAAGAATGAAGTGATACTCATCGCTAAACTTCAACATCGAAATCTTGTAAAACTTTTGGGTTGTTGCATCCAAGGAGAAGAAAAAATGTTGATTTATGAGTACATGCCTAATAAGAGCTTGGATTTCTTCCTATTTGATTCTGCTAAAAGGAAACTTTTAGATTGGTCGAAACGATTCAATATCATATGCGGAATAGCTAGAGGGATTCTTTACCTTCATCAAGATTCGAGATTGAGGATTATACACCGGGATCTAAAAGCAAGTAATGTCTTGCTTGATATTGATATGAATCCGAAAATCTCGGATTTTGGAATGGCCAAAACATTTGGAGGGGATCAAACCGAAGGAAATACTAACAGAGTGGTTGGAACATATGGGTATATGGCACCAGAATACGCCATTGAAGGACAATTTTCTGTTAAGTCTGATGTCTTCAGTTTTGGGATCTTATTGTTGGAGATCATATGTGGAGAGAAGAATAGAGGTTTTTTCCGTCCTAACCATGCTCTCAACCTTATTGGACATGCATGGAAGTTATGGAAGGATGGAAAACCATTAGAGTTGATTGATGTAAGCATAGGAGAATCCTATGCTCTATCCGAAGTGGTACGATGCATCCATGTGAGTCTTTTGTGCCTGCAACAACATCCCGATGATAGACCAACCATGTCAAATGTTGTTCTAATGTTGAGTAGTGAGAGTGCCTTGGCGCAACCAAAACAACCAGGATTCTACATGGAAAGAGATTCTCTTGAAGCATATTGCCTTTCGGGCAAGAATGAATCTTCTACCAATGAATTAACTATTACCCTCATGGAGGCTAGATAA 2442 44.8 MANPPQITTLFLSLFLFLFSSPSLAVDFLTPSQNLTDGGGDATLVSEKGFFELGFFNPGNSSNRYLGIWYKIIPVRTVVWVANRQNPITNSSAVFKINATTSAPVLFQNDAVVWSGESLKPLKNPKLQLLDNGNLVVKDADSDAISWQSFDYPTDTLLPGMKLGWDFKNGIHRRLSAWKTPDDPSPGSLTMEMMNTSYPEPAMWNGSTEFMRSGPWNGLQFSAKPTSALPILVYSYINNKSELTYSYELINSSLIGRMVLNQTVFRREALLWSESEKIWKLYATMPRDYCDTYGLCGAFGSCDIEQMPACQCLNGFHPKVQEKWNLMDYGEGCVRNRPLNCSGGEKIGFRKLPGLKLPDTKLSWVNESMSLSECREECLRNCSCVAYANTDIRGSGNGCAIWFEKLVDIKVVRKGGQDLYVRMLASELETKKTTSSVFVGAIIGAAVLVIAGLVLVGVYIVRSRRRSLEGKDLEGQGDDLELPLFDLTTISNATNNFSNSNKLGEGGFGAVFRGRLVDGHEIAVKRLSSYSRQGTDEFKNEVILIAKLQHRNLVKLLGCCIQGEEKMLIYEYMPNKSLDFFLFDSAKRKLLDWSKRFNIICGIARGILYLHQDSRLRIIHRDLKASNVLLDIDMNPKISDFGMAKTFGGDQTEGNTNRVVGTYGYMAPEYAIEGQFSVKSDVFSFGILLLEIICGEKNRGFFRPNHALNLIGHAWKLWKDGKPLELIDVSIGESYALSEVVRCIHVSLLCLQQHPDDRPTMSNVVLMLSSESALAQPKQPGFYMERDSLEAYCLSGKNESSTNELTITLMEAR 813
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 78542356 78546693 - Hsped.01g13380.1 Hepe01g1338 560448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1338 813 CDD STKc_IRAK 503 768 - -
Hepe01g1338 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 150 - -
Hepe01g1338 813 SMART ntp_6 344 423 IPR003609 -
Hepe01g1338 813 Pfam Domain of unknown function (DUF3403) 769 813 IPR021820 GO:0004674(InterPro)
Hepe01g1338 813 ProSiteProfiles Bulb-type lectin domain profile. 26 150 IPR001480 -
Hepe01g1338 813 Gene3D Transferase(Phosphotransferase) domain 1 573 781 - -
Hepe01g1338 813 CDD PAN_AP_plant 338 422 - -
Hepe01g1338 813 Gene3D Phosphorylase Kinase; domain 1 463 572 - -
Hepe01g1338 813 ProSiteProfiles Protein kinase domain profile. 497 774 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1338 813 CDD B_lectin 39 153 IPR001480 -
Hepe01g1338 813 PIRSF SRK 2 813 IPR024171 GO:0004674(InterPro)
Hepe01g1338 813 ProSiteProfiles PAN/Apple domain profile. 341 424 IPR003609 -
Hepe01g1338 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 573 776 - -
Hepe01g1338 813 Pfam Protein tyrosine and serine/threonine kinase 500 765 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g1338 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 184 IPR036426 -
Hepe01g1338 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g1338 813 Gene3D - 23 150 IPR036426 -
Hepe01g1338 813 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 782 - -
Hepe01g1338 813 Gene3D Hepatocyte Growth Factor 341 425 - -
Hepe01g1338 813 SMART serkin_6 497 768 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1338 813 Pfam S-locus glycoprotein domain 212 319 IPR000858 GO:0048544(InterPro)
Hepe01g1338 813 Pfam PAN-like domain 346 409 IPR003609 -
Hepe01g1338 813 SMART blect_4 35 153 IPR001480 -
Hepe01g1338 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 462 572 - -
Hepe01g1338 813 Pfam D-mannose binding lectin 77 179 IPR001480 -
Hepe01g1338 813 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524(InterPro)
Hepe01g1338 813 SUPERFAMILY Protein kinase-like (PK-like) 482 768 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1334 Hepe-Chr1:78518100 Hepe01g1338 Hepe-Chr1:78542356 0.0 dispersed
Hepe01g1335 Hepe-Chr1:78530222 Hepe01g1338 Hepe-Chr1:78542356 5.44e-308 dispersed
Hepe01g1338 Hepe-Chr1:78542356 Hepe07g1108 Hepe-Chr7:19024716 0.0 dispersed
Hepe01g1336 Hepe-Chr1:78537690 Hepe01g1338 Hepe-Chr1:78542356 8.37e-308 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72465 PF07714 PK_Tyr_Ser-Thr 9.90E-48 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1338 - - - 0.0