Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe01g1351 | ATGATGTTATCTGCATCGCCTTCGACGATTGCTCGAAGCTCTCTGGAGGAAATGCTTGATTCCCTTCGACGAAGGGATGAGATTGATAAGCCTAAGGACTTGCCGCCTGCATTGCCGTCTCGACCCACTTCGAAGGCTCGGATTCCGCCGGTGGGACGGGCTTTGCCGGTCAATTTCAGGGTTAAGGATGACGGTTCCTCAGAGTGCTCAATTAATGGCTTTAATGGAAGGGAAGATGCATTGAGGAAGGAGAATGTTTTGGGTAACTTTGGATTCAAGAGGATAAAAATTGATCAAAACGACGAATCGCCTTACACGTTAGCTTCAGAAAATGATAATGGCTCGAATTGTGCTTCTGCTTTACTTTCAAATATTTCGGTGGACAATATCAGTTATTTTCTTCATAAGAAACTCCGTGTTTGGTGTCAACTTCCAAATGGACAATGGGAGTTAGGAACTATACAGTCAAGCACTGGGACAGAGGCATCTATCATGCTCTCAAACAAAAAGGTCATTAAAGTTCCGACCATAGATCTTTTACCTGCTAATCCAGATATAGTGGAGGGGGTTGATGATCTTGTACAACTTGGTTATTTGAACGAGCCTTCGGTTACTCACAATCTCCACCGAAGATTTTCTCGGGATAAGATTTATAGTAATGCAGGGCCAGTTTTGATTGCAGTCAACCCCTTGAAAGACACTGAACAGTATGGAAAGGAATTTATTACAGCCTATAGACAGAGAGTCATGGACAGACCTCATGTTTATGCTACTGCAGATGCTGCCTATTCTGGGATGATGCAAGATGACGCTAATCAATCTATTATCATCAGTGGCGAAAGTGGAGCGGGAAAAACCGAGACAGCAAAAGCTGCACTTCAATACCTGACTGCTCTTGGTGGGGGCAGTGGCACAGATGATAGAATAACACAGGCGAATGTTGTACTTGAAGCATTCGGGAATGCTAAAACCTCCAGAAACAACAATGCCAGCAGATTTGGGAAGTTGATTGAAATTCTTTTTAGCAGAACAGGGAAGTTATCTGGTGCTGTAATCCAGACTTTTCTGTTGGAAAAGTCAAGAGTTGCTCAGCTGGTCAATGGTGAGAGATCATTCCATATCTTCTATCAACTTTGTGCTGGAGCGCCATCTACACTTAAAGAGAAATTGAATATCAGAGTGGCCAGTGAGTACAGTTACCTTAATCACAGTGAATGCCTGGTGATTGGTGGTGTGGATGATGCACAGAAATTTCAAATTCTTGTGGAAGCCCTAGATAAACTTCAATTCACAAAGGAAGATCAAGAGCATGCATTTGGTTTGCTTGCTGCAGTTTTGTGGATAGGAAACATTACATTTCAAACAATTGATAGTGAAAATCATGTGGAGGTCATGACTAATGAAGCGGTAGCAAATGCTGCCAAGCTGATGGGTTGCAGTTCTAATGAGCTTAAGTTAGTTTTGTCAACACACAAAGTGCAATCAGGCAACGATAGCATTGCTAAAAAATTGACATTACGACAGGCAACTGATGCAAGAGATGCATTGGCAAAATTTATCTATGCAAGCTTATTTGACTGGCTTGTAGAACAGATCAATAAGTCACTTAAACCAGGAAGGGAGCATTCTGGAAGATCCATAAATATCCTTGACATCTATGGGTTTGAGTCATTCAAGAAGAATGGCTTCGAACAATTTTGTATTAATTATGCAAATGAGAGACTGCAGCAGCATTTTATACGGCACATGTTCAAACTTCAGCAGGAGGACTGCGAATTTAATGGGGTTGATGGCACAAAAGTCAACTTCGAAGACAATCAAGAGTGTTTGAATCTTATTGAGAAGAAACAATCTCTAGGAGTTCTAGCTTTGTTGGACGAAGAGTTAAATTTTCCCAAGGCTACAGATTTGACATTTGCTAATAAACTTAAGCAGCACTTTAAATCTCATCCTCGCTTTAAAGGGGAAAGAGGCAGGGCTTTCGGAGTTCGCCATTATGCTGGAGAGGTTGTATACGATACAAATGGGTTTTTGGAGAAGAATAGAGATCTGCTGCATCCAGATTCCATGCAACTCTTGTCATCATGTACTTGCAAGCTACTTAAATTATTTGCCTCCAAAATTACTAACCATTCCCACAAACCAACAGTTTCAATGTACTCTACAGAAGAAGTAGAATCCCCCGAGCCAGGTGTTGGTACCAAGTACAAGGCTCTACTATTTGACCTATTTCATAAATTGGAGCACACCAGCCATCACTTCATTTGTTGCATAAGACCGAACAGAAGTCAAGTTCGTGGCTTCTTTGAGGAGGACCTTGTCTTACAACAGCTTAGGTACTATGGAATTTTGGAGGTTGTTAGGATTTCAAGATCTGGATATCCTACGAGAATGACGCATCAAGAATTTGCTGGAAGGTATGGATTCTTCCTTAAAGAAACTGGATTATTTCAAGATCCATTGAGTATAACATTTGCTGTTCTGCAACAATTTAAAGTCCATCCCGAGATGTACCGTGTTGGTTATACCAAACTATTTTTCCGAACTGGGCAGATTATGGCATTGGAGGAAAGGAGGAAGCAAGTTATGCAAGGCATCCTGGGGGTTCAAAAGTACTTTCGTGGTTGCCATTCCCGTGGCCACTTCCATGAACATAAGCAAGCAGCCACTACCTTACAATCATTGATTCGTGGTGAAAATGCCAGAAGGAAATGTACCGGTAAGGTGAAGAGGTTCTCATTCGTTGTGTACGCTTTCAGTGTTCCTAAGAAGGTTTATGAAATGCAGGCAATCATGCGATTACAATCTGTAATACGTGGTTCGTTGGCTCGAAATCATTTTAACAGCATGCATGATTCGAAGAGGGTTTTTCCTGAAAACAGAAAATTAAAACCGAACACAGGCAGGAGGATTTCAGAGGAAAAAATTCAAGAAGGGGTTGAATCCCTGCCAACTCTGACTGATCTTCAAAAGAGGGTCGTGGAGGCAGAAGCAACCATAGGGAAAAAGGAAGTGGAAAATGCTGCACTGCGGGACCAAGTAAAGCAATTCGAGGCTAGGCGGCTAGAATATGATGCCAAGATGAAGTCCATGGAGGATATGTGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAAAAAGACTCTTGCTGCTGACAATGTAGCCTGTCCACCTGGAAGAGTTGATGTTGGTAACTCACCACCTGACTATTATGATTCTGAGGATACGACGTCAATGGGATCTCGAACCCCTGGTGGTACCACACCTATTAAAGTTTCTGGAATTTCTGAAGTTGGAGCGGGCCGAGAAACGAATGGAACTTTAGCTGCTGTGAACAATCTTGTAAAGGAATTTGAACAAAAACGAAATGCATTTGATGAAGAAGCCAAAGCTTTAACTGAAGCAAAATCAGGCCAGGCACAGACAGGGTCTAATCTGAATCCAGATGAAGAGTACCGTAAAATTAAAGTCCGATTTGAAACATGGAAAAAAGAGTACAAGGCAAGATTGCGGGAAACAAAAACTAAGGTTCATCATAAACATGCACATTTTGAAGTTAATAAAATTGGTCGAAAATGGTGGGGGAAGTTGTCAAGAGCATCATCATAG | 3621 | 41.81 | MMLSASPSTIARSSLEEMLDSLRRRDEIDKPKDLPPALPSRPTSKARIPPVGRALPVNFRVKDDGSSECSINGFNGREDALRKENVLGNFGFKRIKIDQNDESPYTLASENDNGSNCASALLSNISVDNISYFLHKKLRVWCQLPNGQWELGTIQSSTGTEASIMLSNKKVIKVPTIDLLPANPDIVEGVDDLVQLGYLNEPSVTHNLHRRFSRDKIYSNAGPVLIAVNPLKDTEQYGKEFITAYRQRVMDRPHVYATADAAYSGMMQDDANQSIIISGESGAGKTETAKAALQYLTALGGGSGTDDRITQANVVLEAFGNAKTSRNNNASRFGKLIEILFSRTGKLSGAVIQTFLLEKSRVAQLVNGERSFHIFYQLCAGAPSTLKEKLNIRVASEYSYLNHSECLVIGGVDDAQKFQILVEALDKLQFTKEDQEHAFGLLAAVLWIGNITFQTIDSENHVEVMTNEAVANAAKLMGCSSNELKLVLSTHKVQSGNDSIAKKLTLRQATDARDALAKFIYASLFDWLVEQINKSLKPGREHSGRSINILDIYGFESFKKNGFEQFCINYANERLQQHFIRHMFKLQQEDCEFNGVDGTKVNFEDNQECLNLIEKKQSLGVLALLDEELNFPKATDLTFANKLKQHFKSHPRFKGERGRAFGVRHYAGEVVYDTNGFLEKNRDLLHPDSMQLLSSCTCKLLKLFASKITNHSHKPTVSMYSTEEVESPEPGVGTKYKALLFDLFHKLEHTSHHFICCIRPNRSQVRGFFEEDLVLQQLRYYGILEVVRISRSGYPTRMTHQEFAGRYGFFLKETGLFQDPLSITFAVLQQFKVHPEMYRVGYTKLFFRTGQIMALEERRKQVMQGILGVQKYFRGCHSRGHFHEHKQAATTLQSLIRGENARRKCTGKVKRFSFVVYAFSVPKKVYEMQAIMRLQSVIRGSLARNHFNSMHDSKRVFPENRKLKPNTGRRISEEKIQEGVESLPTLTDLQKRVVEAEATIGKKEVENAALRDQVKQFEARRLEYDAKMKSMEDMWQKQMASLQMSLAAAKKTLAADNVACPPGRVDVGNSPPDYYDSEDTTSMGSRTPGGTTPIKVSGISEVGAGRETNGTLAAVNNLVKEFEQKRNAFDEEAKALTEAKSGQAQTGSNLNPDEEYRKIKVRFETWKKEYKARLRETKTKVHHKHAHFEVNKIGRKWWGKLSRASS | 1206 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 78680969 | 78692421 | - | Hsped.01g13510.1 | Hepe01g1351 | 560461 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe01g1351 | 1206 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 135 | 184 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Hepe01g1351 | 1206 | Gene3D | - | 370 | 426 | - | - | |
| Hepe01g1351 | 1206 | CDD | MYSc_Myo8 | 202 | 848 | IPR036022 | - | |
| Hepe01g1351 | 1206 | Gene3D | - | 794 | 861 | - | - | |
| Hepe01g1351 | 1206 | SMART | MYSc_2a | 182 | 861 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Hepe01g1351 | 1206 | ProSiteProfiles | IQ motif profile. | 885 | 913 | - | - | |
| Hepe01g1351 | 1206 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Hepe01g1351 | 1206 | Pfam | IQ calmodulin-binding motif | 929 | 947 | IPR000048 | GO:0005515(InterPro) | |
| Hepe01g1351 | 1206 | Pfam | IQ calmodulin-binding motif | 887 | 905 | IPR000048 | GO:0005515(InterPro) | |
| Hepe01g1351 | 1206 | ProSiteProfiles | IQ motif profile. | 927 | 955 | - | - | |
| Hepe01g1351 | 1206 | ProSiteProfiles | Myosin motor domain profile. | 188 | 860 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Hepe01g1351 | 1206 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
| Hepe01g1351 | 1206 | PANTHER | MYOSIN | 139 | 1194 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Hepe01g1351 | 1206 | SMART | iq_5 | 926 | 948 | IPR000048 | GO:0005515(InterPro) | |
| Hepe01g1351 | 1206 | SMART | iq_5 | 884 | 906 | IPR000048 | GO:0005515(InterPro) | |
| Hepe01g1351 | 1206 | SMART | iq_5 | 861 | 883 | IPR000048 | GO:0005515(InterPro) | |
| Hepe01g1351 | 1206 | FunFam | Myosin heavy chain | 370 | 426 | - | - | |
| Hepe01g1351 | 1206 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 144 | 906 | IPR027417 | - | |
| Hepe01g1351 | 1206 | Gene3D | - | 866 | 911 | - | - | |
| Hepe01g1351 | 1206 | Coils | Coil | 1112 | 1139 | - | - | |
| Hepe01g1351 | 1206 | PRINTS | Myosin heavy chain signature | 599 | 627 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Hepe01g1351 | 1206 | PRINTS | Myosin heavy chain signature | 272 | 297 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Hepe01g1351 | 1206 | PRINTS | Myosin heavy chain signature | 546 | 574 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Hepe01g1351 | 1206 | PRINTS | Myosin heavy chain signature | 314 | 341 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Hepe01g1351 | 1206 | PRINTS | Myosin heavy chain signature | 218 | 237 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Hepe01g1351 | 1206 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 427 | 535 | - | - | |
| Hepe01g1351 | 1206 | Coils | Coil | 986 | 1034 | - | - | |
| Hepe01g1351 | 1206 | Gene3D | Kinesin motor domain | 187 | 793 | IPR036961 | - | |
| Hepe01g1351 | 1206 | Gene3D | - | 558 | 750 | - | - | |
| Hepe01g1351 | 1206 | FunFam | Myosin IE heavy chain | 427 | 535 | - | - | |
| Hepe01g1351 | 1206 | Pfam | Myosin head (motor domain) | 190 | 848 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Hepe01g1351 | 1206 | MobiDBLite | consensus disorder prediction | 17 | 34 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe01g0908 | Hepe-Chr1:73332036 | Hepe01g1351 | Hepe-Chr1:78680969 | 0.0 | dispersed | |
| Hepe01g1351 | Hepe-Chr1:78680969 | Hepe08g1437 | Hepe-Chr8:17233581 | 1.12e-163 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe01g1351 | K10357 | - | csv:101210624 | 1982.99 |