Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1360 ATGGTGAAAATGAAATTGTGTTATCTGTCTGTCGTTTTGTTCATGTGTATTGGATCTTACGCCTCTTTCACTCCCATTGATAACTATTTGATAGTTTGTGGTTCTCCACAAAATATCACCTTCCAAGGTAGAACGTTTGTTCCTGATTCTGCACATTCATTGCTCTCCCATGATGGTGGAAGCTTTGTTGTTGTTAGTTCAAATGGTGCTACTGCTCCATCTCCTATCTATCAATCTGCTCGGGTTTTCACGGGCATTGCTTCGTACAAATTCCAAATCAAGAAAGAAGGCCGGCATTGGATTCGGTTGTATTTTTATCCTGTATCGAAGTCCGAGCGGAATCTGGCTTCTGCTTCGATAACTGTTGTTACGGAGAAGTTTGTGCTGTTGAACAACTTCACTTTCAAGAACTACAATGGTTCTTTTATGTTCAAGGAGTATGCAGTCAATGTCACTTCGGATTCCTTGACCCTTACTTTCATTCCATCTAATGGTTCGGTTTCGTTTGTTAATGCGATCGAAGTTGTCTCGGTGCCTGATGAGCTGCTACCTGATCAAGCATTGGCTTTGAATCCATCTGCCCCTTTTAGCGGTATCTCGGAACTTGCTCTTGAAACTGTTTACCGGTTGAACATGGGGGGTCCTTTACTCACTTCGCAAAACGATACGCTTGGAAGGACTTGGGAGAATGATATGAAATACCTCCATGTCAACAGTTCTGCAGTGAATGTCTCTGCCAGTCCAGGGAGCATAAAGTATCATCCCGGTGTTACACCAGAAACTGCACCAAATTGGGTTTATGCTACTGCCGATGCCATGGGAGACCCGAATGTACCGAACGTGAACTTCAACTTGACTTGGGTTTTCTCTGTTGAGCCAAATTTCCAATACTTCGTACGTGTGCATTTTTGTGATATAATGAGCAAGGCTCTCAATAATCTGGTTTTCAATCTCTACATCAATTCTGATAATGCTCTGGGAAGCTTTGATCTGTCGTCGTTAACTGGTGACTTGGGCGTGCCTTACTACAAAGACTTCATTTCCAACTCAGCAGATTCAGCTACTTTAACTGTTAGCGTCGGTCCAGATATAATGGCAGACATCACTAATGCAACCATGAATGGCTTGGAGATAATGAAGATAAGCAATCAAGCCAGCAGCTTGGATGGAACTTCGTCCGTTGAAAGTCTTTTCCCAAATGCACCCTCGAAGAAGAACAATGTAGTAATCATTGTTGGTTCTGTCTTGGGAGCTGTAGTAGGCCTTGCTTTGCTCGTCTTGTGTTATTGCTGCTTCGTAGGTCGCAAATCGAAGACTACTCAACCAGCACACCCTTGGCTGCCTTTGCCCTTATATGGAAACTCTCAAACCATGACAAAAGTGTCAACAACTTCTCAAAAGAGTGGAACTGCAAGTTTCATTTCTTTGTCTTCCTCCAGTCTTGGCAGATTCTTCACATTTCAGGAAATCCTTGATGCTGCCAACAAATTTGATGAAAACCTGCTCCTTGGAGTTGGTGGTTTTGGTAGGGTTTACAAGGGAACACTTGAAGATGGTATGAAAGTCGCTGTTAAAAGAGGTAACCCCAGATCGGAACAAGGTCTTGCCGAATTTCGAACTGAAATAGAAATGTTATCAAAGCTCCGTCATCGTCACCTGGTGTCTCTTATTGGCTACTGTGATGAAAGGTCAGAAATGATTCTTGTCTATGAATATATGGCAAATGGACCTCTCAGGAGTCATTTGTATGGAACGGATCTACCACCGTTGTCGTGGAAGCAACGACTTGATATTTGCATTGGTGCTGCAAGAGGGCTTCATTATCTTCACACTGGTGCAGCTCAAAGCATAATACACCGGGATGTTAAAACGACGAACATTCTCTTGGACGAGAATTTCGTTGCCAAAGTTGCAGATTTTGGCCTCTCAAAAACTGGGCCATCTCTGGATCAGACTCATGTAAGTACTGCTGTCAAGGGTAGTTTTGGTTACCTCGATCCTGAATACTTCAGACGACAACAGCTCACTGAGAAGTCAGATGTATATTCATTCGGGGTCGTGCTAATGGAAGTTCTCTGCACGAGGCCAGCGTTAAACCCTGTTCTTCCCCGGGAACAAGTCAATATAGCAGAATGGGCAATGACCTGGCAGAAGAAGGGCATGCTAGATCATATCATGGACCCGAATCTGGTTGGTAAAGTTAATCCAGCATCGCTTAAAAAGTTCGGGGAAACAGCTGAGAAGTGTTTGGCAGAGTATGGGGTTGACAGGCCGTCTATGGGTGACGTCCTGTGGAACCTGGAATACGCCCTTCAGCTCGAGGAAACTTCATCTGCTCTAATGGAACCTGAAGACAACAGCACAAACCACATCCCTACCATCCAACTGACCCCACTTGAGCCATTTGATAACAGTGTAAGCATGATTGATGGAGGGAACTCTGGCACCGACGACGATGCAGAAGATGCTGCAACAAGTGCAGTATTTTCGCAGCTCGTAAATCCTCGTGGGCGATGA 2517 44.38 MVKMKLCYLSVVLFMCIGSYASFTPIDNYLIVCGSPQNITFQGRTFVPDSAHSLLSHDGGSFVVVSSNGATAPSPIYQSARVFTGIASYKFQIKKEGRHWIRLYFYPVSKSERNLASASITVVTEKFVLLNNFTFKNYNGSFMFKEYAVNVTSDSLTLTFIPSNGSVSFVNAIEVVSVPDELLPDQALALNPSAPFSGISELALETVYRLNMGGPLLTSQNDTLGRTWENDMKYLHVNSSAVNVSASPGSIKYHPGVTPETAPNWVYATADAMGDPNVPNVNFNLTWVFSVEPNFQYFVRVHFCDIMSKALNNLVFNLYINSDNALGSFDLSSLTGDLGVPYYKDFISNSADSATLTVSVGPDIMADITNATMNGLEIMKISNQASSLDGTSSVESLFPNAPSKKNNVVIIVGSVLGAVVGLALLVLCYCCFVGRKSKTTQPAHPWLPLPLYGNSQTMTKVSTTSQKSGTASFISLSSSSLGRFFTFQEILDAANKFDENLLLGVGGFGRVYKGTLEDGMKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLDICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDHIMDPNLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLEETSSALMEPEDNSTNHIPTIQLTPLEPFDNSVSMIDGGNSGTDDDAEDAATSAVFSQLVNPRGR 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 78766674 78770111 - Hsped.01g13600.1 Hepe01g1360 560470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1360 838 FunFam Putative receptor-like protein kinase 28 179 - -
Hepe01g1360 838 Gene3D Phosphorylase Kinase; domain 1 455 572 - -
Hepe01g1360 838 CDD STKc_IRAK 503 768 - -
Hepe01g1360 838 Gene3D - 202 383 - -
Hepe01g1360 838 Gene3D - 28 178 - -
Hepe01g1360 838 FunFam Receptor-like protein kinase FERONIA 573 789 - -
Hepe01g1360 838 ProSiteProfiles Protein kinase domain profile. 497 770 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1360 838 MobiDBLite consensus disorder prediction 802 823 - -
Hepe01g1360 838 Pfam Protein tyrosine and serine/threonine kinase 503 694 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g1360 838 SUPERFAMILY Protein kinase-like (PK-like) 473 768 IPR011009 -
Hepe01g1360 838 Gene3D Transferase(Phosphotransferase) domain 1 573 790 - -
Hepe01g1360 838 FunFam Receptor-like protein kinase FERONIA 203 383 - -
Hepe01g1360 838 PANTHER OS07G0166700 PROTEIN 485 774 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Hepe01g1360 838 Pfam Malectin-like domain 33 381 IPR024788 -
Hepe01g1360 838 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g1360 838 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524(InterPro)
Hepe01g1360 838 SMART serkin_6 497 770 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1360 838 FunFam receptor-like protein kinase FERONIA 458 572 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1360 Hepe-Chr1:78766674 Hepe08g0830 Hepe-Chr8:7511904 4.16e-283 dispersed
Hepe01g1360 Hepe-Chr1:78766674 Hepe06g0410 Hepe-Chr6:15484148 9.99e-284 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72466 PF12819 Malectin_like 1.00E-37 CL0202 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1360 - - - 0.0