Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1391 ATGGCGACGGACGGAGGCAAGACGGCTGTGACATCGCCTGATTACTTGGCGACCGAAGTGGTCTGTGAAACTAAGGCTCTACTTTCAGAGCTGTGCCGCCATTTTTATGGGCTTGGATGGGTATCTGGAACTGGTGGCAGTATCACCATCAAGGTCCATGATGATGCTGTTCCCAAGCAGAATCAGCTCGTTCTCATGTCTCCTTCTGGAGTCCAGAAGGAGCGAATGGTACCGGAGGACATGTACGTGTTATCTCCTGATGGTTCTGTCTTATCTTCTCCTACTGCAAAGCCATTCCCACACAAGCCTCCAAAATGTTCGGATTGTGGCCCCCTTTTCATGAAGGCATATCAGATGCGAAATGCTGGAGCTGTTATTCACAGTCATGGGATAGAATCATGCCTTGCAACAATGATCAATCCATCAGCGAAGGAATTTAGAATTACTCATATGGAAATGATCAAAGGAATCAAAGGGCATGGTTACTACGATGAACTTGTGATCCCAATAATAGAAAATACAGCTTATGAATATGAGCTCACAGAATCTCTAGCTAAAGCGATTGAAGCCTACCCGAAAACAACTGCTGTGCTTGTTCGAAACCATGGCATTTATGTATGGGGAGATTCATGGATCCATGCAAAAACTCAGGCTGAATGTTACCACTATCTCTTTGATGCGGCCATCAAGCTTTATCAATTGGGCCTAGACTGGTCTACTCCAAATCATGGTCCCATTCAGAACGTCAAAGAAGTTGTAGTAGGTGGTTGCAACAATGGAGCATCTTCAAAGCAGCGTTGCATTGTTCTTGACATAGAAGGAACTACTACTCCAATATCATTTGTCACCGATGTTCTCTTTCCATATGCTCGTGACAATGTCCGCAAACATTTGTCTCTAACATTTGACACTGCAGAGACTAAAGAAGATATTAAGTTGTTGCGATCTCAGGTGCAAGATGATCTGAAAAAAGGTGTTGCTGGTGCCGTGCCTATTCCTCTTGATGATTCTGCAAAAGAGGAGGTTATTGCAGCTTTAGTTGCGAATGTTGAAGCCATGATAAAAGCTGACAGGAAGATTCCTGCCCTAAAACAGTTGCAAGGTCATATATGGCTAACTGGATTTGAGAACAATGAATTGAAAGGAGAAGTTTTTGAGGATGTACCAAGAGCTCTGGAAAGGTGGCACGCTTCGGGCATAAAGGTATACATATACTCAAGCGGCAGTAGGTTGGCACAGAGGCTTCTATTTGGAAATACAAAATATGGGGATCTGAGAAAATATTTGTCTGGATATTTTGATACGGCAGTGGGGAACAAAAGAGAAATGCCCAGTTATGTCGAAATCAGAGAGTCTGTTGGAGTTGATAAGCCATCGGAAATTTTGTTTGTCACTGATGTTTTTCAGGAGGGTGTAGCTGCAAAAGCAGCAGGATTGGATGTGAATATATCTATCCGACCCGGAAACGTTCCTCTTCCAGACAATCACGGGTTCAAGACCATTCAATCTTTTTCAGAAATCTGA 1524 43.5 MATDGGKTAVTSPDYLATEVVCETKALLSELCRHFYGLGWVSGTGGSITIKVHDDAVPKQNQLVLMSPSGVQKERMVPEDMYVLSPDGSVLSSPTAKPFPHKPPKCSDCGPLFMKAYQMRNAGAVIHSHGIESCLATMINPSAKEFRITHMEMIKGIKGHGYYDELVIPIIENTAYEYELTESLAKAIEAYPKTTAVLVRNHGIYVWGDSWIHAKTQAECYHYLFDAAIKLYQLGLDWSTPNHGPIQNVKEVVVGGCNNGASSKQRCIVLDIEGTTTPISFVTDVLFPYARDNVRKHLSLTFDTAETKEDIKLLRSQVQDDLKKGVAGAVPIPLDDSAKEEVIAALVANVEAMIKADRKIPALKQLQGHIWLTGFENNELKGEVFEDVPRALERWHASGIKVYIYSSGSRLAQRLLFGNTKYGDLRKYLSGYFDTAVGNKREMPSYVEIRESVGVDKPSEILFVTDVFQEGVAAKAAGLDVNISIRPGNVPLPDNHGFKTIQSFSEI 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 79120701 79128773 - Hsped.01g13910.1 Hepe01g1391 560501

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1391 507 SFLD C1.5.4: Enolase-phosphatase Like 266 506 - -
Hepe01g1391 507 Gene3D - 22 246 IPR036409 -
Hepe01g1391 507 NCBIfam acireductone synthase 266 506 IPR023943 GO:0000287(InterPro)|GO:0019509(InterPro)|GO:0043874(InterPro)
Hepe01g1391 507 Pfam haloacid dehalogenase-like hydrolase 266 478 - -
Hepe01g1391 507 FunFam Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 279 375 - -
Hepe01g1391 507 PANTHER ENOLASE-PHOSPHATASE E1 262 507 - GO:0019509(PANTHER)|GO:0043874(PANTHER)
Hepe01g1391 507 Pfam Class II Aldolase and Adducin N-terminal domain 28 227 IPR001303 -
Hepe01g1391 507 FunFam Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 375 507 - -
Hepe01g1391 507 SMART Aldolase_II_2 26 229 IPR001303 -
Hepe01g1391 507 SUPERFAMILY HAD-like 264 507 IPR036412 -
Hepe01g1391 507 Gene3D - 269 495 IPR023214 -
Hepe01g1391 507 SUPERFAMILY AraD/HMP-PK domain-like 23 242 IPR036409 -
Hepe01g1391 507 SFLD enolase-phosphatase 266 506 IPR023943 GO:0000287(InterPro)|GO:0019509(InterPro)|GO:0043874(InterPro)
Hepe01g1391 507 CDD HAD_EP 267 488 IPR023943 GO:0000287(InterPro)|GO:0019509(InterPro)|GO:0043874(InterPro)
Hepe01g1391 507 Hamap Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1. 13 507 IPR027505 -
Hepe01g1391 507 Gene3D - 279 380 - -
Hepe01g1391 507 NCBIfam methylthioribulose 1-phosphate dehydratase 28 233 IPR017714 GO:0005737(InterPro)|GO:0019509(InterPro)|GO:0046872(InterPro)
Hepe01g1391 507 Hamap Methylthioribulose-1-phosphate dehydratase [APIP]. 13 237 IPR027514 GO:0005737(InterPro)|GO:0019509(InterPro)|GO:0046872(InterPro)
Hepe01g1391 507 FunFam Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 21 246 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1391 K16054 - - csv:101205098 943.725
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1391 Hepe-Chr1:79120701 Hepe07g1027 Hepe-Chr7:14615707 1.53e-160 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g201 . . . . Bpe09g00237 . . Bma13g00947 Cmo16g00433 . Cma01g01212 . Car01g01036 . Sed04g2403 . Cpe02g00698 Bhi09g03436 Tan01g0815 . . Hepe01g1391 . . Cla11g01757 Cam11g1824 Cec11g1844 Cco11g1851 Clacu11g1984 Cmu11g1794 Cre11g2201 Cone6ag0152 Cone9ag0177 . Cone15ag1052 Lsi04g02067 Csa04g02338 Chy07g00069 . . Blo10g00760 . Bda12g00837 . . . . . Cmo01g01266 . . Cma16g00399 . Car16g00364 Cpe14g00336 . . . . . . . . . . . . . . . . . Chy06g01160 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002536 1 3 1 2 1 1 2 1 1 2 2 2 2 2 2 2 1 3 1 2 2 2 2 2 2 2 2 4 3 2 57