Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1400 ATGTCTGACGTGGCGAGTATAGCAGAGGCAGTGGCAGCAAGGTTTAGTTCTTTGGAGCTTATTGGAAGAGGATCTTTTGGTGATGTCTACAAGGCGTTTGACAAGGAGCTTAATAAAGAAGTTGCTATCAAAGTTATTGATTTGGAAGAATCTGAGGATGAAATTGAGGATATTCAGAAGGAAATTTCTGTTTTGTCACAATGTCGATCACCCTACATTACTGAGTACTATGGTTCTTATCTCCACGAGACGAAGTTATGGATAATAATGGAGTATATGGCTGGTGGCTCTGTTGCAGATCTGCTGCAGTCTGGGCAACCGCTTGATGAAATGTCAATTGCGTGCATTCTACGTGATTTGCTGCATGCAATTGATTATTTGCACAGTGAAGGAAAAATTCACAGGGACATTAAAGCGGCAAACATTTTACTGAGTGAAAATGGTGATGTTAAGGTTGCAGATTTTGGTGTTTCTGCTCAATTAACAAGGACAATATCAAGGAGAAAGACATTTGTAGGAACTCCATTCTGGATGGCACCAGAGGTAATTCAGAATTCTGAAGGATACAACGAGAAGGCAGACATCTGGTCTCTAGGAATCACTGCTATTGAAATGGCAAAAGGGGAGCCTCCACTTGCTGATCTTCATCCCATGAGAGTTCTTTTTATCATACCTCGAGAAAGTCCACCTCAGTTAGATGAGCATTTTTCTCGCCCTATGAAAGAATTAGTGTCACTGTGTCTGAAGAAAATACCTGTTGAGAGACCCAGTGCCAAAGAGCTTCTGAAGCATCGATTCATTAAGAATGCCAGGAAGAGTCCTAGGCTTCAGGAGAGAATAAGAGAACGGCCGAAGTACCAAATAAAGGAAGAAGAAGATGAAGAAACATCAACTAATGGTCCTAGAGCTATGGGTGAAATGTCAGACACCGTGAAAGTATCAAGAAATTTGAGAGAAGAAACTGTTCGTGCCAGCAACCAGAGTAAAACTCCAAAGAATGCTGGATGGGACTTTAGCATTGGGGGACCAAATAGTACAGGTACTGTTCGAAGTGTAGTAAAACCACCTCAAAATAGGGAAAGAAAACCAGAAATTCCTTATGCTCAGGCTGCATCTAGTAGAGTTCCAGAGAGTGGTAACTGGCTAGCAGCATCTGGAAATGCACCACGCGACATAGCAGAAAACGCTAGAGATTCATACAATATGGGGGATGCTAGTGAAGATGAAGATATATCTGTAAGTGGTTCAGGAACCGTCGTGATCCGGTCTCCTAGGGGATCTCAAGCATCTGCTCAAGTTCATAATGAAAGCAGTCCGTCTGGAAGTGCACAAGGATATTTTGAGGACACATCTTTTAGTGGCACTGTTGTTATGCGTGGTCAACGTGATGATTCTGATTCTCCCCGGACTCCAAAATCCAGATTGGGAGTTCAAGAAAGGTCTTCAAGTTTGTCTCCTGAAGATAGTGCAGCAAACCTTGCGGAGGCAATGGCTTCAATTCAAACAGGATTGAAGAAAGCTAATGCAAGGGAAAGATCAGCTCGCAATAAACTCAATGACAGGAAGGAAAATAGAAGAACAGAGCAAACAGTGAGTAGCTCTGACTCTTCGAGGCATTCTCGTGAATTCTATGATGCACCAAGAGCATTGCCAAAACCATCTCTATCAATTGATGATGAAGAACGTGCCAAAATTGCATTGTCTTCTGCACCTTTATCGATTTTGTTTATGTCATCCTTGAAAGAGGTTGTTGCGGATGATTCGGAAGGATCACCTGCTCGTACCGTAATTAATGCACTTTTAAGTATGGAACACCTAAAACCTGGATCATGTGAGGTTCTTGTTACTAAGTTGCTCCAGAAATTGGCCAGTTCAAAGGAATCTTCACTGAAAGATTTACAAGACCTGGCAACTCGTATATTCAACAAGGGAAAGACAGTTCCTGAAGATACACAAAATGTCACAGATTCTGATAGCAGCAAAAGGCAACCGAACAGGGAACTTCATTCAAATTCTAATTTGAGCTCGCTTGCTAGATTTTTACTCTCCAGATGGCAAGGTCAGGTGTCGAGGGATCTCAGTCCAGCCTAA 2091 42.28 MSDVASIAEAVAARFSSLELIGRGSFGDVYKAFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSYLHETKLWIIMEYMAGGSVADLLQSGQPLDEMSIACILRDLLHAIDYLHSEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRESPPQLDEHFSRPMKELVSLCLKKIPVERPSAKELLKHRFIKNARKSPRLQERIRERPKYQIKEEEDEETSTNGPRAMGEMSDTVKVSRNLREETVRASNQSKTPKNAGWDFSIGGPNSTGTVRSVVKPPQNRERKPEIPYAQAASSRVPESGNWLAASGNAPRDIAENARDSYNMGDASEDEDISVSGSGTVVIRSPRGSQASAQVHNESSPSGSAQGYFEDTSFSGTVVMRGQRDDSDSPRTPKSRLGVQERSSSLSPEDSAANLAEAMASIQTGLKKANARERSARNKLNDRKENRRTEQTVSSSDSSRHSREFYDAPRALPKPSLSIDDEERAKIALSSAPLSILFMSSLKEVVADDSEGSPARTVINALLSMEHLKPGSCEVLVTKLLQKLASSKESSLKDLQDLATRIFNKGKTVPEDTQNVTDSDSSKRQPNRELHSNSNLSSLARFLLSRWQGQVSRDLSPA 696
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 79237830 79251912 + Hsped.01g14000.1 Hepe01g1400 560510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1400 696 Coils Coil 41 68 - -
Hepe01g1400 696 MobiDBLite consensus disorder prediction 273 299 - -
Hepe01g1400 696 MobiDBLite consensus disorder prediction 504 552 - -
Hepe01g1400 696 MobiDBLite consensus disorder prediction 273 490 - -
Hepe01g1400 696 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 13 656 IPR050629 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)
Hepe01g1400 696 CDD STKc_MST3_like 14 287 - -
Hepe01g1400 696 Gene3D Transferase(Phosphotransferase) domain 1 12 304 - -
Hepe01g1400 696 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524(InterPro)
Hepe01g1400 696 SUPERFAMILY Protein kinase-like (PK-like) 13 329 IPR011009 -
Hepe01g1400 696 FunFam serine/threonine-protein kinase dst1 isoform X1 12 301 - -
Hepe01g1400 696 SMART serkin_6 15 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1400 696 MobiDBLite consensus disorder prediction 411 460 - -
Hepe01g1400 696 MobiDBLite consensus disorder prediction 320 353 - -
Hepe01g1400 696 MobiDBLite consensus disorder prediction 508 529 - -
Hepe01g1400 696 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1400 696 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1400 696 Coils Coil 504 524 - -
Hepe01g1400 696 MobiDBLite consensus disorder prediction 647 670 - -
Hepe01g1400 696 MobiDBLite consensus disorder prediction 471 489 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1400 Hepe-Chr1:79237830 Hepe10g1802 Hepe-Chr10:54764390 7.33e-75 dispersed
Hepe01g1400 Hepe-Chr1:79237830 Hepe02g1817 Hepe-Chr2:27204815 7.49e-60 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72467 PF00069 Pkinase 1.40E-68 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1400 K08838 - csv:101214412 1231.47