Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1457 ATGGATTTCAAGAGTGTTCGTGTTCGTGTTCGTGTTTGTGTTCGTGTTCGTGTTCTTGTCAGTGGCTTGCTTCTTTTCAACTTCTTGTTTGGATTTGGAACCGATGCCCAACCCCTGCTGTCTCAACAAGAAGTAAGAGCCCTTGAAGCAATATCTGCAGAGCTAAAGATCTTAAATTGGAGCGTCCACCAAAATTCTTGTAATAATCCAGACGTTGCCTTTGCCAATGTAAAAATCAATGATGCTACCATGAGAGTGGTCAACTGCACTTGTTCCAATGTTTCTTGCAGTGTCACCAACATACAGCTAAAAACTCAGAATCTAGTTGGAGTTCTGCCTGCAGCATTTGCAAATCTCACCCAACTACGACAATTAGATCTCACTCGTAATTTTATAAATGGATCAATTCCTAAGGAGTTTGGTCGCCTTCCTCTTTTCGATCTTTCCATGCTGGGAAACCGACTGAGTGGTCCAATTCCTTCCGAAATTGGTGATATTGCTTCACTTCAACAATTGGTGTTGGAACACAATCAGCTCAGAGGAAATCTTCCCGAAAGCCTCGGCAAACTAAGCCGCTTGAACAAACTATTTCTTTCTGCAAATAATTTCACAGGACCGATTCCAGAATCTTATGGAAACTTGAACAACTTGACTGAGTTTCGGATAGATGGAAATGGTATATCAGGAAAGCTGCCCAAATTTATTGGCAATTGGATCAACCTTCAGAGACTGGATGTTCAAGGAACTTCTATGGAGACTCCTATTCCGGATGCCATATCCGAGTTGAAAAACTTAACCGAACTGAGGATATCTGATTTGAAGGGACAACCAATTAGTTTCCCCAATTTGACTCAATTGACATCTTTAGAAACATTGGTCCTCAGAAATTGCATAATTGAGGATAAAATCCCTGATTACTTTGACCGGTTTAGTAGATTAAGAATTTTGGATTTAAGCTTCAACAGATTAAATGGTACAATTCCAGAGCCATTACAAAGTCTATCGACGCGTGATAATCGAGCCTTGTTTCTAAATGACAACTTGCTAACTGGTGAAGTACCAAACTGGATTGGGGGAAACAAAGCCAACATAGATTTATCTTACAACAATTTTACAGGGTCACCTGTTCCCACCAGTTGTCAACAATCTAAAGTGAACTTGGTTTCCAGTTATTCAAGTGCAACTAATCAAAGTGTTACTTGGTGCCTGAAGGGTGATCTCCCTTGCACTAGAGAAGATCGATCTCGTTCATTGTTCATCAACTGTGGAGGAGAGGAGATGGAGTTTGATGGCAATTTATACGAAAGGGATATGAATAATAAGGATGATGAGTCCATTTTCTTTTCTACAGAAAGATGGGGTTACAGCAGTACTGGTATTTTCATGGATAATAATTCTGAGGCTAATTACTTAACAAGTAGTAGTGTATCTACTTTAGGCGTCTATAGGACAGCTCGGTTTGCACCTGTTTCGCTTAGGTACTATGGATTTTGCTTGGAAAGTGGAAGTTACAATGTGAAGCTTCACTTTGCTGAAACAATGTTTACTGCAGACCAAACATTTAGTAGCTTGGGGAAGCGTATATTTGACATCTCAATCCAAGGAAACTTGGTTGAAAAGGACTTTAACATAGTGGAGAGAGCCAGAGGTGTTGATAAGAGCTTTGTTCTGGAAGTGCCTAATGTTATAGTAACTGGCAGCACTCTTGAGATCCACTTATATTGGGCTGGTAAAGGGACAATGGCCATTCCATACAAATGGGTGTATGGACCTCTCATATCTGCAATCACAGTTACATCAAACTTTGGTGAGGCAACCAAAGGGCTATCAGCTGGAGCTATTGCTGGCATTGTTGTTGGTAGTTTCGTGTTCGCCGTTTTAGTATTGGTTGTTCTTCGAAGGAAGGGTTACTTAGGCGGAAAGGAAACTGAAGACAAAGGACTCCGGGACCTAAAATTACAGACAAATTATTTTAGTTTAAGTCAAATCAAAACAGCCACAAAAAACTTTGACCGGGCATATAAGATCGGCGAGGGAGGTTTTGGTCCTGTCTACAAGGGAGTACTATCGGATGGCTCTTCAATTGCTGTAAAACAACTATCTTCTAAATCAAGGCAGGGGAACCGTGAATTCATCACTGAAATAGGGATGATATCTGCATTACAACATCCAAATCTTGTTAAGCTTTATGGTTGTTGTATTGAAGGAAACCAATTATTGCTTATTTATGAGTATTTAGAGAACAATAATCTTGCTCGTGCACTTTTTAGTAAAATTGCAGTTGAAGTATCAAACATGAAGCACAATGTAGTTGATCGAGATGAAAGGTTCAGAGTGTTTGAGAAGCTGTCACAAGACAGCCTAACAAGCATTTCAACTACAACGTCGCAAGGCATTCAGATGCAGGGAAGCATCATAATTGATGGGCCATGGATCGACTCATCATCTACTTCTACCCAAAACAAGGATGAGAGTACTCGAGAGTATTCTTCAAGTAGCAGTCTCCTTCGAGATTGA 2517 40.29 MDFKSVRVRVRVCVRVRVLVSGLLLFNFLFGFGTDAQPLLSQQEVRALEAISAELKILNWSVHQNSCNNPDVAFANVKINDATMRVVNCTCSNVSCSVTNIQLKTQNLVGVLPAAFANLTQLRQLDLTRNFINGSIPKEFGRLPLFDLSMLGNRLSGPIPSEIGDIASLQQLVLEHNQLRGNLPESLGKLSRLNKLFLSANNFTGPIPESYGNLNNLTEFRIDGNGISGKLPKFIGNWINLQRLDVQGTSMETPIPDAISELKNLTELRISDLKGQPISFPNLTQLTSLETLVLRNCIIEDKIPDYFDRFSRLRILDLSFNRLNGTIPEPLQSLSTRDNRALFLNDNLLTGEVPNWIGGNKANIDLSYNNFTGSPVPTSCQQSKVNLVSSYSSATNQSVTWCLKGDLPCTREDRSRSLFINCGGEEMEFDGNLYERDMNNKDDESIFFSTERWGYSSTGIFMDNNSEANYLTSSSVSTLGVYRTARFAPVSLRYYGFCLESGSYNVKLHFAETMFTADQTFSSLGKRIFDISIQGNLVEKDFNIVERARGVDKSFVLEVPNVIVTGSTLEIHLYWAGKGTMAIPYKWVYGPLISAITVTSNFGEATKGLSAGAIAGIVVGSFVFAVLVLVVLRRKGYLGGKETEDKGLRDLKLQTNYFSLSQIKTATKNFDRAYKIGEGGFGPVYKGVLSDGSSIAVKQLSSKSRQGNREFITEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYLENNNLARALFSKIAVEVSNMKHNVVDRDERFRVFEKLSQDSLTSISTTTSQGIQMQGSIIIDGPWIDSSSTSTQNKDESTREYSSSSSLLRD 838
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 79791418 79801370 - Hsped.01g14570.1 Hepe01g1457 560567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1457 838 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 34 765 IPR051824 -
Hepe01g1457 838 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 184 276 - -
Hepe01g1457 838 Pfam Leucine Rich Repeat 121 143 IPR001611 GO:0005515(InterPro)
Hepe01g1457 838 Pfam Leucine Rich Repeat 193 214 IPR001611 GO:0005515(InterPro)
Hepe01g1457 838 Pfam Leucine Rich Repeat 168 190 IPR001611 GO:0005515(InterPro)
Hepe01g1457 838 Pfam Leucine Rich Repeat 312 334 IPR001611 GO:0005515(InterPro)
Hepe01g1457 838 ProSiteProfiles Protein kinase domain profile. 670 838 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1457 838 Gene3D Phosphorylase Kinase; domain 1 639 745 - -
Hepe01g1457 838 SUPERFAMILY L domain-like 84 335 - -
Hepe01g1457 838 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 639 745 - -
Hepe01g1457 838 SUPERFAMILY Protein kinase-like (PK-like) 656 780 IPR011009 -
Hepe01g1457 838 Gene3D Ribonuclease Inhibitor 41 276 IPR032675 -
Hepe01g1457 838 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 415 601 - -
Hepe01g1457 838 Pfam Malectin domain 418 596 IPR021720 -
Hepe01g1457 838 SMART tyrkin_6 670 805 IPR020635 GO:0004713(InterPro)|GO:0006468(InterPro)
Hepe01g1457 838 Gene3D - 416 602 - -
Hepe01g1457 838 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 93 183 - -
Hepe01g1457 838 MobiDBLite consensus disorder prediction 815 838 - -
Hepe01g1457 838 Pfam Protein tyrosine and serine/threonine kinase 674 799 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g1457 838 Gene3D Ribonuclease Inhibitor 277 402 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1457 Hepe-Chr1:79791418 Hepe01g1459 Hepe-Chr1:79824025 3.49e-287 dispersed
Hepe01g1457 Hepe-Chr1:79791418 Hepe01g1458 Hepe-Chr1:79804377 2.15e-304 tandem
Hepe01g1457 Hepe-Chr1:79791418 Hepe02g0061 Hepe-Chr2:705993 2.33e-129 wgd
Hepe01g1457 Hepe-Chr1:79791418 Hepe07g0962 Hepe-Chr7:12912952 1.04e-199 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72468 PF11721 Malectin 5.40E-38 CL0202 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1457 - - - 0.0