Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1459 ATGGATTTAAAGAGTGTTCATGTTCTTGTCTGTGGTTTGCTGCTTTTCAACTGCTTCTTCAGATTTGGATCTAATGCACAACCTCTGCCTCAGCAAGAAGTGCGAGCCCTTGAAGCAATATCTGCAGAGCTAAAGAACTTAAATTGGAAAGTCCACCAAAATTCTTGCATCAATGGCGATGGATTTTTCAATGAAGCCATCGATCGTCAGAAAACCATCAGAATGGTGAACTGCAGTTGCTCCAATGTTTCTTGCAGCGTTACTAGTATCCTGCTAAGAGGTATCAATCTAGTAGGAGTTCTACCAGCAACATTTGGAAATTTGACTAAGCTACAACAGTTAGATCTCACTCGCAACTTTATATCTGGATCAATTCCTAGGGAGTTTGGGCGTATTCCTCTCGTTATCCTTTCCATGTTGGGAAACCGGCTGAGTGGTTCAATTCCTCCAGAAATTGGTCATATTTCTACACTTGAGGAACTGGTGTTGGAACACAATCAGCTCGGAGGAAATCTTCCCGAAAGCCTCGGCAAACTAAGCCGCTTGAACAAACTATTGCTTTCTGCAAATAATTTCACAGGACCGATTCCAGAATCTTATGGAACCTTGAAGAACTTGACTGATTTTCGGATAGATGGAAATGGTATATCAGGAAAGCTACCCGAATTTATTGGCAATTGGACCAACCTTCAGAGACTGGATATTCAAGGAACTTCTATGGAGACCCCTATTCCGGATGCCATATCCGAGTTGAAAAACTTAATTGAACTGAGGATAACTGATTTGAAAGGACCACCAATTAGTTTCCCCAATTTGACTCAATTGACATTTCTAAAAGAATTGGTCCTAAGAAATTGCTTAATTGAGGGTTCAATCCCTGAATATTTTGGACAGTTTAGCAGATTAAATTCTTTGGATTTAAGCTTCAACAGATTAAATGGTACTGTTCCAGAGCCATTATTTCAGAATCTATCAAAGCGGAATCGGGTCTTGTTTCTAACTAACAACTTGCTAACGGGTCAAGTACCAAACTGGATTGCTGGAAGCGAAGGCAACATAGATTTATCTTACAACAGATTTACAGGGTCAGGTGTTCACAGTTGTCAAGAATCTAACGTGAACTTGGTTTCAAGTCATTCAACTATGACGAATGAATCCGTTTTTTGGTGCCTAAGGAAGGATCTCCCTTGCTCTCGTGAAGCTCGATTTCATTCGCTGTTCATTAACTGTGGAGGACAGATTATGGAGCTTGATGGTAAGGAATACGAAGAGGATGTTACTCAGGGTGGCAAATCCAATTTCTTACCTTCCTCAGGAAGATGGGGTTACAGCAGCACTGGTGTTTTCTTAGACGATGTTGACGGCCATCCTTACACAACGAGTAGCGGTGTGTCTTCTTTAGGCATCTATGCCACAGCACGACTTGCGCCTCTTTCACTCAAATACTATGGATTTTGCTTGCAAAGGGGAAGTTACAATGTGAAGCTTCACTTTGCTGAAATAATGTTTACTGAAGACCAAACATTCAGGAGCCTGGGAAAGCGCATATTTGATATCTCAATTCAAGGAAACTTGGTTAAAAAAGATTTTAATATAATGGAGGAAGCTGAAGGTGTTGGTAAGAGCTATATTTTAGAAGAGCCGAATATTTTGGTCAATGGAAGCACACTGGAGATCCACTTGTATTGGGCTGGTAAAGGAACAAATGCCATTCCGGAGAGAGGGGTGTATGGACCTTTGATATCTGCAATCAGTGTGAGATCGAATTTTGATTTGAAGACTGGAGGACTATCAGCTGGAGCTATAGCAGGAATTGTTGTTGGTACTTTTGTGATTGTTGTGTTAGTATTGATTGTTCTTCGAAGGAAATTGGGCAATAAGGATACCGAAGACAACGAATTGCGGGCCTTTGTTTTGCGGACGGGTTATTTCAGTTTAAGACAAATTAAAGCAGCCACCAACAACTTTGACTCAGCATATAAGATCGGCGAGGGAGGTTTTGGTCCTGTCTACAAGGGTGTACTATCAGATGGTACTTTAATTGCCGTAAAGCAGCAATCCTCTAAATCAAGTCAAGGGAATCGTGAATTTGTCACTGAGATTGGCATGATATCTGCATTACAACATCCAAATCTTGTTAAACTTTATGGTTGTTGTATTGAAGAAAACCAGTTATTGCTTATATATGAGTATTTGGAGAACAATAGTCTTGCTCGTGCTCTTTTTGGCCGTGAGGAGCATCAACTACAATTGGATTGGCCAGTAAGAATGAAAATATGTTTGGGAATAGCAAAGGGATTGGCTTACCTTCATGAAGAGTCTAGATTGAAAATTGTTCACAGAGATATAAAAGCTACCAATGTGCTACTTGATAAAAACCTAAATGCCAAGATCTCTGATTTCGGGTTGGCTAAGCTTCATGAAGAGGAGAACACCCATATCAGAACAAGAATTGCTGGCACCTTGTCTCTCACCGATCTCACTTTAGCTCATATTATTGAACCCAACAAAAAAATTGATGCTTGTCCTTTACTAATACAACTTTTGATTTCCTTATTTAGCTCAAATTATTTGAAACCAATGAAAAACTGTTGCCTTGTTTTTTTCTGA 2610 40.0 MDLKSVHVLVCGLLLFNCFFRFGSNAQPLPQQEVRALEAISAELKNLNWKVHQNSCINGDGFFNEAIDRQKTIRMVNCSCSNVSCSVTSILLRGINLVGVLPATFGNLTKLQQLDLTRNFISGSIPREFGRIPLVILSMLGNRLSGSIPPEIGHISTLEELVLEHNQLGGNLPESLGKLSRLNKLLLSANNFTGPIPESYGTLKNLTDFRIDGNGISGKLPEFIGNWTNLQRLDIQGTSMETPIPDAISELKNLIELRITDLKGPPISFPNLTQLTFLKELVLRNCLIEGSIPEYFGQFSRLNSLDLSFNRLNGTVPEPLFQNLSKRNRVLFLTNNLLTGQVPNWIAGSEGNIDLSYNRFTGSGVHSCQESNVNLVSSHSTMTNESVFWCLRKDLPCSREARFHSLFINCGGQIMELDGKEYEEDVTQGGKSNFLPSSGRWGYSSTGVFLDDVDGHPYTTSSGVSSLGIYATARLAPLSLKYYGFCLQRGSYNVKLHFAEIMFTEDQTFRSLGKRIFDISIQGNLVKKDFNIMEEAEGVGKSYILEEPNILVNGSTLEIHLYWAGKGTNAIPERGVYGPLISAISVRSNFDLKTGGLSAGAIAGIVVGTFVIVVLVLIVLRRKLGNKDTEDNELRAFVLRTGYFSLRQIKAATNNFDSAYKIGEGGFGPVYKGVLSDGTLIAVKQQSSKSSQGNREFVTEIGMISALQHPNLVKLYGCCIEENQLLLIYEYLENNSLARALFGREEHQLQLDWPVRMKICLGIAKGLAYLHEESRLKIVHRDIKATNVLLDKNLNAKISDFGLAKLHEEENTHIRTRIAGTLSLTDLTLAHIIEPNKKIDACPLLIQLLISLFSSNYLKPMKNCCLVFF 869
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 79824025 79837257 - Hsped.01g14590.1 Hepe01g1459 560569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1459 869 ProSiteProfiles Protein kinase domain profile. 656 869 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1459 869 Gene3D Ribonuclease Inhibitor 265 379 IPR032675 -
Hepe01g1459 869 FunFam Os07g0541700 protein 732 821 - -
Hepe01g1459 869 SMART serkin_6 656 869 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1459 869 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 19 823 IPR051824 -
Hepe01g1459 869 SUPERFAMILY L domain-like 73 322 - -
Hepe01g1459 869 Pfam Leucine Rich Repeat 302 321 IPR001611 GO:0005515(InterPro)
Hepe01g1459 869 Pfam Leucine Rich Repeat 110 131 IPR001611 GO:0005515(InterPro)
Hepe01g1459 869 Pfam Leucine Rich Repeat 278 298 IPR001611 GO:0005515(InterPro)
Hepe01g1459 869 Pfam Leucine Rich Repeat 158 179 IPR001611 GO:0005515(InterPro)
Hepe01g1459 869 Gene3D - 404 590 - -
Hepe01g1459 869 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 403 589 - -
Hepe01g1459 869 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 173 265 - -
Hepe01g1459 869 Gene3D Phosphorylase Kinase; domain 1 620 731 - -
Hepe01g1459 869 Pfam Protein tyrosine and serine/threonine kinase 660 813 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g1459 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 778 790 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g1459 869 Gene3D Ribonuclease Inhibitor 71 264 IPR032675 -
Hepe01g1459 869 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 625 731 - -
Hepe01g1459 869 SUPERFAMILY Protein kinase-like (PK-like) 636 822 IPR011009 -
Hepe01g1459 869 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 82 172 - -
Hepe01g1459 869 Pfam Malectin domain 406 584 IPR021720 -
Hepe01g1459 869 Gene3D Transferase(Phosphotransferase) domain 1 732 842 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1457 Hepe-Chr1:79791418 Hepe01g1459 Hepe-Chr1:79824025 3.49e-287 dispersed
Hepe01g1459 Hepe-Chr1:79824025 Hepe07g0962 Hepe-Chr7:12912952 4.65e-281 dispersed
Hepe01g1458 Hepe-Chr1:79804377 Hepe01g1459 Hepe-Chr1:79824025 7.83e-258 tandem
Hepe01g1459 Hepe-Chr1:79824025 Hepe01g1460 Hepe-Chr1:79842354 0.0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72470 PF11721 Malectin 1.10E-36 CL0202 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1459 - - - 0.0