Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1461 ATGTTTGTGGCTCGATTCCTCGCCGTCGTTTTCCTCTCATCTCTCTGCTTCATAACCCTCGCTTCCGCCGCCACTCGCCTGCCGAACGACGAAGTTGAGGCGTTGAGGGAGATCGGAAAGACATTGGGGAAGACGGACTGGAATTACGACGCCGATCCATGCGGCGGCACTGGTACCGGTTGGATATCTAATTCTTTCAACGCTAGTTTTGTTAATAATGTCACCTGCAACTGCACGTTCCAGAATAATACCGTCTGCCACGTCACTAACATTCTTCTGAAGGCGCTGAGCCTTCCAGGTACTCTGCCACCGCAAATAGTGAGGCTGCCTTTCCTGCAAGAACTTGATCTCACCCGCAACTTTCTCAGCGGCCCAATCCCTCCAGAATGGGGTTCTTCCAAGCTTGTCAAAATTTCCCTTCTTGGAAATCGATTGACGGGTTCAATCCCAAAAGCGATTGGCAACATCAGCACTCTTTCAGAGTTGGTCCTGGAAATGAATCATTTATCTGGAACTGTACCTCCAGAACTTGGAAATTTGGCCAACTTAACAAGATTACTTCTTACCTCAAACAACTTTTCTGGGGAGCTCCCACCTTCACTGGCAAGGATAACCACTTTGACGGACTTTCGAATTAGTGATAATCACTTCACAGGGCCAATACCTGAGTTTATTCAGAATTGGACGAATCTTCAAAAAGTAGCTATTCAGGCAAGCGGGTTGAGCGGGCCAATTCCTTCTGAAATTGGACTTTTGACAACTTTATCTGATTTGAGAATCAGTGACTTGAATGGAGGTGCATCACCCTTTCCACCCCTTAATACTTTGACAAAATTAAAAGTCCTGATACTGAGGAGTTGCAATATAACTGATGGGCTGCCCAACAATCTTGCTGGGTTGACAGTATTGAAAACCTTAGACTTCAGCTTCAACAAAATTACTGGACCAATACCTGCCAGCTTTGAAGCGTTGAAAAAAGTGGATAGCATATATTTAGCTGGAAACTTGCTAAATGGACCAGTGCCCACTTGGATGCTACTGCAAGGAGAAAGCATTGATCTCTCTTATAACAAATTTACTCAGACAAATGGTCAAAATGATTGTCAATCACGAAATTTAAACCTGTTTGCGAGCTCTTCACAAGACAATAATTCTGGAACAGTTTCATGTTTAGCGGCCACTTGTAGAAAAACTTCGTACTCTCTCCATATCAACTGCGGTGGGAACGAAGAATTAATTAACGGAACAATCAAGTTTGATGGAGACACAAACACCGGAAAATCATCATTATTTTTTCCAGGTGGAGCAAATTGGGGATTTAGCAGCACTGGTAATTTTATGGACGATGATCGATCAACAGACGACTATATTGCAGTAAATGAATCTGCTCTTTCAATGCCAAATCCTGAATTGTACATGAGGGCACGCATTTCTCCAATCTCTCTTACTTATTATGCATATTGCATGGGTACTGGAAACTACACAGTAAGCCTCCATTTTGCTGAGATATCGTTTACTAATGACAAATCATATAAAAGCCTTGGCAGGCGCGTATTTGATGTCTACGTTCAGGGAAAGCGGGAGTTGAAGGATTTTAATATTGCAGATGCAGCAGGTGGTGTTGGCAAACCTTTTGTAAAGAAATTCACAGTTTCTGTGACTAGTGGTACTATAGAGATCCGCCTATTTTGGGCTGGGAAGGGGACAAATGCAATCCCTGTAAGAGGAGTTTATGGTCCTTTAATTTCCGCCATTTCTGTTGATCCTGACTTTGTGCCACCATCAGAAGGTGGAAATGCCATATCTGCCGGTGTGGTGGTTGGAATTGTGGCTGCTGTGGTGATTGTAATCATATTGGTTCTTGGAGTCTTATGGTGGAAAGGCTGCCTAAGAAAGAAAAGCACACTTGAACAAGAGTTGAAGGGTCTAGATCTAGGAACAGGTTCATTTTCATTAAGACAAATCAGAGCTGCCACTAACAATTTTGATGCTGCCAATAAGATTGGAGAAGGTGGTTTTGGTCCTGTTTTCAAGGGTGTTCTGGGAGATGGCACTGTAATTGCAGTGAAGCAACTTTCTTCCAAATCAAAGCAAGGAAATCGTGAATTTGTAAATGAGATAGGCATGATATCTGCATTGCAGCACCCTCATCTAGTGAAGCTTCATGGATGCTGTATTGAAGGAAATCAACTTTTGCTCATATATGAGTATCTGGAAAATAATAGTCTTGCCCGTGCCTTATTCGGGAAGGTTGCTGTGAAGGAGGTGGTTTCAGATCCTAGTGTCTCGAAAAAAGATGTGAATGCAATGTGGAGCCAAATTTATCGCCAGAAAGGGGAAATGATGGGCGAGAGCCAGACGCAAAGTATACCGATGGATGGACCATGGACTGGTTCAACAACTGCCAGTGATCTCTATCCCATCAACATGGATTCTAAATACTTGGAGAATAGGAACTAG 2460 43.21 MFVARFLAVVFLSSLCFITLASAATRLPNDEVEALREIGKTLGKTDWNYDADPCGGTGTGWISNSFNASFVNNVTCNCTFQNNTVCHVTNILLKALSLPGTLPPQIVRLPFLQELDLTRNFLSGPIPPEWGSSKLVKISLLGNRLTGSIPKAIGNISTLSELVLEMNHLSGTVPPELGNLANLTRLLLTSNNFSGELPPSLARITTLTDFRISDNHFTGPIPEFIQNWTNLQKVAIQASGLSGPIPSEIGLLTTLSDLRISDLNGGASPFPPLNTLTKLKVLILRSCNITDGLPNNLAGLTVLKTLDFSFNKITGPIPASFEALKKVDSIYLAGNLLNGPVPTWMLLQGESIDLSYNKFTQTNGQNDCQSRNLNLFASSSQDNNSGTVSCLAATCRKTSYSLHINCGGNEELINGTIKFDGDTNTGKSSLFFPGGANWGFSSTGNFMDDDRSTDDYIAVNESALSMPNPELYMRARISPISLTYYAYCMGTGNYTVSLHFAEISFTNDKSYKSLGRRVFDVYVQGKRELKDFNIADAAGGVGKPFVKKFTVSVTSGTIEIRLFWAGKGTNAIPVRGVYGPLISAISVDPDFVPPSEGGNAISAGVVVGIVAAVVIVIILVLGVLWWKGCLRKKSTLEQELKGLDLGTGSFSLRQIRAATNNFDAANKIGEGGFGPVFKGVLGDGTVIAVKQLSSKSKQGNREFVNEIGMISALQHPHLVKLHGCCIEGNQLLLIYEYLENNSLARALFGKVAVKEVVSDPSVSKKDVNAMWSQIYRQKGEMMGESQTQSIPMDGPWTGSTTASDLYPINMDSKYLENRN 819
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 79885916 79897617 + Hsped.01g14610.1 Hepe01g1461 560571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1461 819 ProSiteProfiles Protein kinase domain profile. 662 819 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1461 819 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 12 759 IPR051824 -
Hepe01g1461 819 Gene3D Phosphorylase Kinase; domain 1 627 737 - -
Hepe01g1461 819 SUPERFAMILY Protein kinase-like (PK-like) 646 751 IPR011009 -
Hepe01g1461 819 Pfam Protein tyrosine and serine/threonine kinase 665 759 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g1461 819 Pfam Leucine rich repeat 278 337 IPR001611 GO:0005515(InterPro)
Hepe01g1461 819 Gene3D - 397 589 - -
Hepe01g1461 819 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 28 264 - -
Hepe01g1461 819 Gene3D Ribonuclease Inhibitor 266 376 IPR032675 -
Hepe01g1461 819 SMART tyrkin_6 662 815 IPR020635 GO:0004713(InterPro)|GO:0006468(InterPro)
Hepe01g1461 819 Pfam Malectin domain 401 585 IPR021720 -
Hepe01g1461 819 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 631 737 - -
Hepe01g1461 819 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 399 590 - -
Hepe01g1461 819 SUPERFAMILY L domain-like 82 360 - -
Hepe01g1461 819 Pfam Leucine Rich Repeat 207 228 IPR001611 GO:0005515(InterPro)
Hepe01g1461 819 Pfam Leucine Rich Repeat 182 202 IPR001611 GO:0005515(InterPro)
Hepe01g1461 819 Pfam Leucine Rich Repeat 112 131 IPR001611 GO:0005515(InterPro)
Hepe01g1461 819 Pfam Leucine Rich Repeat 159 180 IPR001611 GO:0005515(InterPro)
Hepe01g1461 819 Gene3D Ribonuclease Inhibitor 28 265 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1461 Hepe-Chr1:79885916 Hepe01g1464 Hepe-Chr1:79952648 1.60e-262 dispersed
Hepe01g1460 Hepe-Chr1:79842354 Hepe01g1461 Hepe-Chr1:79885916 7.30e-159 tandem
Hepe01g1461 Hepe-Chr1:79885916 Hepe01g1462 Hepe-Chr1:79899219 0.0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72472 PF11721 Malectin 1.50E-41 CL0202 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1461 - - - 0.0