Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1464 ATGTTCCTGTCAAGAACCCTCTTTCTAATTTCTTTCACTGGTTTTTTCTTCTTCTTCAATGTTGGAATTCATTCTCTATCCACTAGATTGCCTGTTGATGAAGTGGAAGCATTACAAGAAATAGGAAAGATTTTGGGGAAAAAAGACTGGAATTTTAGTGCAGATCCCTGCAATGGAGCCTATGGATGGATATCTCAACCCAACCAAATCCCCAACAATCTTTCTCTTTCTGGTTTTGAAAATAAGCTCACCTGTGATTGCACCTTTCTCAATGCCACAGTCTGCCATGTTATCACCATAGTTCTGAAATCGCAGAGCCTTCAAGGCACTCTCCCGCCCCATCTTCTCCGCTTGCCATTTCTGCAGCAAATTGATCTCACTCGGAACTATCTTAGCGGCCAAATTCCTCCAGAATGGGGCTCTACGAATCTCGTCAATATTTCCCTTCTTGGAAATCGGTTGACGGGTTTGATTCCAGAGGAGATTGGAAACATCACTACTCTGGAGAATTTGGTCCTAGAAATCAATCAGCTGTCAGGAAGCCTTCCTCAAGCGCTTGGAAATTTGCCTCAGATACAGAGATTACATCTTACCTCGAACAACTTTTCTGGGGAGTTGCCAATGTCACTGGGAAAGCTTACCACATTGAAGGAATTTCGAATTGGTGACAATAACTTCTCGGGCCCCATACCGAATTTCATACGTAATTGGACAAATCTTACTGAACTATTCATTCAGGCAAGTGGATTGAGTGGGCCCATTCCTTCTGACATTGGATTATTGACAAAATTATCTGACTTGAGAATCAGTGACTTGAGTGGAGCTTCATCACCCTTTCCACCTCTTAGTAATTTGGAAGACATGACAATTCTGATATTGAGAAGTTGCAACATCACTGGAAGGCTGCCCAATTATCTGGATAGGATGCCATCATTGAAAATCTTAGACCTCAGCTTTAACAAACTAAGTGGACGAATTCCGACCAGATATGATGCTCTTAAAGGGTTGGATAACATATTTTTAACTGGAAACATGCTAAATGGATCAGTGCCTGATTGGATGTTGAAAGGAAAGGGCATCGATCTTTCCTATAATAATTTTACAGTCAAGGTTGCTGGGGAAAGCTGTCGGTCCCAAAAAGTGAATCTCTTTGCAAGCTCTTCACAAGACAGTGATTATGGAATTCTTTCATGTTTAGCAGGCTCAACCTGTCCAAAATCTTGGTACTCTCTTCATATAAATTGTGGTGGAAAGGAACAAACCATTAATGGAACTACATCTTTTAAAGGAGACCGAAATGAAGGCAGCTCTATGTTTTTTGTAACTGGAACAAATTGGGCAATCAGCAACACTGGTAGTTTCTTGGATGATGATGACTCTCAAGATGATTACGCTGCAACAAATTCTTCTACTCTTTCTATGATAAATCCTGAACTGTATATGACTGCACGCATTTCTCCATTATCTGTTACTTACTATGGGTTTTGTATGGGAAGTGGAAACTACACAGTAAGCCTCCATTTTGCAGAGATAATGTTTACTGATGACAAAACATTCAGTAGTCTCGGCAGACGCATATTTGATGTTTATATTCAGAAAAGGCTGGTGCTAGAGGATTTCAATATAGTGGATGCAGCAGGTGGTGTTGGTAAAGCAGTCATAAAAAAGTTCCCAGTTACCGTAACGAATGGTACGTTGGAGATCCGCTTCTATTGGGCCGGGAAGGGGACAAATGCTATCCCTGTGAGGGGAGTTTATGGTCCTCTTATATCAGCTATATCAGTAGATCCTGACTTTGAGGCTCCATCTGAGGGCGGAGGAACTGGAAAGTCTGGCATATCTGTAGGTGCAGTGATAGGCATCGCAGCTGCTGCGGTTTTTGTTATATTATTGGCTCTCGGAATCCTGTGGTGGAGTGTATGTCTACGACGGGAAAAGACACTTGAACAAGAGTTACGAGGTTTGGATTTGCAAACTTGCTCTTTTACATTAAGGCAAATAAAAGCCGCCACAAACAACTTTGACGCTGCCAATAAGATTGGTGAAGGTGGTTTCGGGCCTGTCTACAAGGGTGTTCTTGCTGATGGCACAGCAATTGCAGTAAAGCAACTGTCTTCAAAATCGAAACAAGGGAATCGTGAGTTCGTGAATGAGATCGGCATGATATCTGCTTTGCAACACCCACATCTAGTCAAGCTTTATGGATGCTGCATTGAAGGAAATCAGCTTTTGTTAGTATATGAATACATGGAAAACAATAGCCTTGCCCATGTCTTGTTTGGTCAAGAAGAAAGTGAACTAGAATTGGATTGGTCAACAAGGCACAAGATCTGTGTTGGTATAGCAAGAGGTTTGGCTTATCTTCATGAAGAGTCCAGACTAAAGATTGTCCACAGGGACATCAAAGCCACTAATGTTCTGTTAGACAAAGATTTGAATCCCAAGATATCCGACTTCGGCTTGGCCAAGCTTGATGAAGACGGAAATACTCACATAAGCACTCGGATCGCCGGAACTATTGGATACATGGCGCCAGAATATGCAATGCGAGGACACCTGACTGATAAAGCAGATGTTTATAGCTTCGGTGTTGTGGCTTTAGAAATAGTTAGCGGAAGGAGAAACACTTCTCTCTTGCCAGATAACGATTGCTCATATCTTCTAGACTCGGCTCTGAAGTTGAAAGAGAAAAACAGTTTAATGGAGCTAGTTGATCCAAGGTTAGGCTCCAACTTCAACAAGGGAGAAGCATTGAGAATGATCAAAGTTGCTCTCCACAGCACTAATGTCTCTCCTGCAGCCAGACCTAACATGTCATCAGTAGTGAGCATGCTGGAAGGCAAGCAGGCTATCGAGGACATAGTGTCGGATTCAAGTGTCACTAGAGAAGCAAGAAATGCAGCATGGATTTGTTTGTTGCAGGACGACGAGCGATCTGAGAATGAGAGCCAGAAGCATGGCTTGTTTGCTGATGTTTCGGCAACAGGTTCTTCAGCATCTGCGAGCGATCTCTATCCGATCAACATGTCTCAGTACTTGAATATTAGAGATAACAGACTATGA 3063 42.38 MFLSRTLFLISFTGFFFFFNVGIHSLSTRLPVDEVEALQEIGKILGKKDWNFSADPCNGAYGWISQPNQIPNNLSLSGFENKLTCDCTFLNATVCHVITIVLKSQSLQGTLPPHLLRLPFLQQIDLTRNYLSGQIPPEWGSTNLVNISLLGNRLTGLIPEEIGNITTLENLVLEINQLSGSLPQALGNLPQIQRLHLTSNNFSGELPMSLGKLTTLKEFRIGDNNFSGPIPNFIRNWTNLTELFIQASGLSGPIPSDIGLLTKLSDLRISDLSGASSPFPPLSNLEDMTILILRSCNITGRLPNYLDRMPSLKILDLSFNKLSGRIPTRYDALKGLDNIFLTGNMLNGSVPDWMLKGKGIDLSYNNFTVKVAGESCRSQKVNLFASSSQDSDYGILSCLAGSTCPKSWYSLHINCGGKEQTINGTTSFKGDRNEGSSMFFVTGTNWAISNTGSFLDDDDSQDDYAATNSSTLSMINPELYMTARISPLSVTYYGFCMGSGNYTVSLHFAEIMFTDDKTFSSLGRRIFDVYIQKRLVLEDFNIVDAAGGVGKAVIKKFPVTVTNGTLEIRFYWAGKGTNAIPVRGVYGPLISAISVDPDFEAPSEGGGTGKSGISVGAVIGIAAAAVFVILLALGILWWSVCLRREKTLEQELRGLDLQTCSFTLRQIKAATNNFDAANKIGEGGFGPVYKGVLADGTAIAVKQLSSKSKQGNREFVNEIGMISALQHPHLVKLYGCCIEGNQLLLVYEYMENNSLAHVLFGQEESELELDWSTRHKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEDGNTHISTRIAGTIGYMAPEYAMRGHLTDKADVYSFGVVALEIVSGRRNTSLLPDNDCSYLLDSALKLKEKNSLMELVDPRLGSNFNKGEALRMIKVALHSTNVSPAARPNMSSVVSMLEGKQAIEDIVSDSSVTREARNAAWICLLQDDERSENESQKHGLFADVSATGSSASASDLYPINMSQYLNIRDNRL 1020
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 79952648 79961397 + Hsped.01g14640.1 Hepe01g1464 560574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1464 1020 Gene3D - 408 597 - -
Hepe01g1464 1020 Gene3D Transferase(Phosphotransferase) domain 1 750 966 - -
Hepe01g1464 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g1464 1020 CDD STKc_IRAK 680 947 - -
Hepe01g1464 1020 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 22 960 IPR051824 -
Hepe01g1464 1020 Pfam Malectin domain 410 593 IPR021720 -
Hepe01g1464 1020 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 408 598 - -
Hepe01g1464 1020 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 31 273 - -
Hepe01g1464 1020 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 643 749 - -
Hepe01g1464 1020 Gene3D Ribonuclease Inhibitor 64 206 IPR032675 -
Hepe01g1464 1020 Gene3D Ribonuclease Inhibitor 271 390 IPR032675 -
Hepe01g1464 1020 SUPERFAMILY Protein kinase-like (PK-like) 659 947 IPR011009 -
Hepe01g1464 1020 Pfam Protein tyrosine and serine/threonine kinase 677 943 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g1464 1020 Gene3D Phosphorylase Kinase; domain 1 638 749 - -
Hepe01g1464 1020 SMART serkin_6 674 908 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1464 1020 ProSiteProfiles Protein kinase domain profile. 674 951 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1464 1020 Gene3D Ribonuclease Inhibitor 207 270 IPR032675 -
Hepe01g1464 1020 SUPERFAMILY L domain-like 67 354 - -
Hepe01g1464 1020 FunFam Putative LRR receptor-like serine/threonine-protein kinase 750 957 - -
Hepe01g1464 1020 Pfam Leucine Rich Repeat 192 213 IPR001611 GO:0005515(InterPro)
Hepe01g1464 1020 Pfam Leucine Rich Repeat 311 328 IPR001611 GO:0005515(InterPro)
Hepe01g1464 1020 Pfam Leucine Rich Repeat 121 140 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1461 Hepe-Chr1:79885916 Hepe01g1464 Hepe-Chr1:79952648 1.60e-262 dispersed
Hepe01g1462 Hepe-Chr1:79899219 Hepe01g1464 Hepe-Chr1:79952648 4.91e-255 dispersed
Hepe01g1464 Hepe-Chr1:79952648 Hepe07g1830 Hepe-Chr7:61087546 1.68e-260 dispersed
Hepe10g0900 Hepe-Chr10:28740608 Hepe01g1464 Hepe-Chr1:79952648 1.79e-69 dispersed
Hepe01g1463 Hepe-Chr1:79934998 Hepe01g1464 Hepe-Chr1:79952648 0.0 tandem
Hepe01g1464 Hepe-Chr1:79952648 Hepe04g0834 Hepe-Chr4:62599988 3.14e-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72475 PF07714 PK_Tyr_Ser-Thr 6.60E-49 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1464 - - - 0.0