Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1477 ATGGATAAAGGTCAGGCTATAGCACTCTACGTCACAATCAGTTGCGTCGCTTTCGTCGTGTCGAAGATCTTCATAGCGTTGCTCCTTTACAAGCGCTGGAGAAGACGACACATGGTTTATGAAGATGGGATATCAGGTGGGAAGATGGTCATGTTCAAGTCTCCAGCAACAAAGTCCCTAAAATCAGATGCATTTCTGAAGAAAACACTAAAACTGAACAACAAGGACATCATTGGCTCTGGAGGCCATGGGACTGTTTACAAACTTGCACTAAGTGACTCCATGACATTTGCTGTGAAAAGACTGAACAGAGGAAGTTCTGAAAGAGATCAAGGATTCGAAAGAGAATTGGAAACGATGGGAGACATAAAGCATCGGAATATCGTAACGCTTCATGGATACTACACTGCTCCTCACTATAATCTCCTTATATATGAGCTAATGCCTAATGGAAGTTTGTATGCACATCTACATGGAAGATCAAATGGGAGGGTTTTGGATTGGCCATCACGATATAAAATAGCGGTAGGTGCAGCGAGAGGCATATCGTACCTTCATCACGACTGCATCCCGCACATCATACATAGAGATATCAAGTCAAGCAACATATTGTTGGATCAAAACATGGACGCCCAAGTTTCTGACTTTGGATTGGCGACGCTGATGGAACCTGACAAGACTCATGTATCGACAATTGTGGCAGGCACATTCGGATACTTGGCTCCAGAATACTTTGATACCGGGCGAGCAACGGTGAAAGGAGATGTCTACAGCTTTGGTGTAGTGCTACTCGAGCTCTTAACAGGGAAAAAACCAACTGATGAGGCATTTTTGGAAGAGGGAACTAAACTTGTGACGTGGGTGAAAACAGTTGTTCAGGAGAAAAGGGAAGAGTATGTACTTGACAGTAGTTTGGATTGTTGTCCGGTTGAGGAAGTTAATGGCGTATTCAGCATTGCATTGAAGTGTCTTGAACCAGAACCCGCTCAGCGACCGACAATGGCAGAGGTTGTCAAAATGCTCGAGCACATAAAGTCGAATAGAATTGTAACAGAAACTTGA 1062 43.79 MDKGQAIALYVTISCVAFVVSKIFIALLLYKRWRRRHMVYEDGISGGKMVMFKSPATKSLKSDAFLKKTLKLNNKDIIGSGGHGTVYKLALSDSMTFAVKRLNRGSSERDQGFERELETMGDIKHRNIVTLHGYYTAPHYNLLIYELMPNGSLYAHLHGRSNGRVLDWPSRYKIAVGAARGISYLHHDCIPHIIHRDIKSSNILLDQNMDAQVSDFGLATLMEPDKTHVSTIVAGTFGYLAPEYFDTGRATVKGDVYSFGVVLLELLTGKKPTDEAFLEEGTKLVTWVKTVVQEKREEYVLDSSLDCCPVEEVNGVFSIALKCLEPEPAQRPTMAEVVKMLEHIKSNRIVTET 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 80076338 80078514 + Hsped.01g14770.1 Hepe01g1477 560587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1477 353 Gene3D Transferase(Phosphotransferase) domain 1 148 352 - -
Hepe01g1477 353 PANTHER OS01G0750732 PROTEIN 12 344 IPR050885 -
Hepe01g1477 353 SMART serkin_6 72 350 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1477 353 Gene3D Phosphorylase Kinase; domain 1 50 147 - -
Hepe01g1477 353 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Hepe01g1477 353 FunFam Receptor-like serine/threonine-protein kinase 43 147 - -
Hepe01g1477 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g1477 353 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 148 353 - -
Hepe01g1477 353 Pfam Protein kinase domain 74 339 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1477 353 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524(InterPro)
Hepe01g1477 353 SUPERFAMILY Protein kinase-like (PK-like) 67 344 IPR011009 -
Hepe01g1477 353 ProSiteProfiles Protein kinase domain profile. 72 346 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1477 Hepe-Chr1:80076338 Hepe01g1565 Hepe-Chr1:80849149 3.09e-97 dispersed
Hepe02g1595 Hepe-Chr2:21191210 Hepe01g1477 Hepe-Chr1:80076338 6.02e-46 dispersed
Hepe06g1185 Hepe-Chr6:61349035 Hepe01g1477 Hepe-Chr1:80076338 9.73e-61 dispersed
Hepe06g1283 Hepe-Chr6:62800840 Hepe01g1477 Hepe-Chr1:80076338 7.54e-50 dispersed
Hepe04g1575 Hepe-Chr4:71253623 Hepe01g1477 Hepe-Chr1:80076338 2.53e-57 transposed
Hepe01g1477 Hepe-Chr1:80076338 Hepe02g0036 Hepe-Chr2:518877 3.77e-71 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72476 PF00069 Pkinase 1.60E-47 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1477 - - - 0.0