Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1481 ATGTCGATTTCAATTTGGATAATTGTGTTATGTTCAATTGTATTGGGATTGGGATGGAAATTTGTGGATTGGATTTGGGTGAAGCCCAAGAAATTAGAGAAGCTTTTAAGACAGCAAGGATTCGCCGGAAATTCTTACCGGATTCTCTACGGCGACTTGAAAGACAGAGCCGCCATGAGAGATCAGGCCATCTCCAAGCCGATGAACTTCTCCAATCATATTGCGCCACGTGTTATTCCTTCTGTTTATCATACCATCCACAATTATGCATTTGGGAGTAGCTACGAGGAAGGGAAGAAGATCTTCAAACTTCAAACTGAACTAGCTCATTTGGTGATTCAATCTACCTTAGGGATTTACATTCCAGGATGGAGATTTCTACCCACAAAGTCAAACAATAAAATGAAAGAGATGAGTAAAGAGATAACAACTTTGATCTTGGGTATTATAAATGAACGACAAAAGTCTATGAAGGCAGGTGAAGCTATACATAGCGATCTATTAGGACTTCTCATGGAATCCAATTTCAATGAAATTCGAGAACATGGAAACAATAAAGACATTGGAATGAGCATAGAAGATGTTATTGAGGAATGCAAGATTTTCTATATCGCTGGCCAAGAAACTACAGCTACATTATTAATTTGGACAATGGTTTTGTTGAGTTCATACTCGGAATGGCAAGAGCGAGCAAGAGCAGAGGTCTTTGAGGTCTTTGGTAATAAAAAACCAGACTATGATGGTTTAAGTCGCCTAAAAGTTGTAACTATGATCTTGAACGAGGTTCTTAGGTTATACCCACCAGTGACTCTGCTTGCTCGTCTTGTTAAGAAAGAAACAAGACTTGGAAAATTGACATTACCAGCCGGAGTGATGTTGGGGATACCAGTTATTCTTCTCCAACGTGATCATGAGTTGTGGGGTGCAGATGCAGATGAATTTAAACCAGAACGATTTTCAGAGGGAGTTTCTAAAGCAACAAAGAATCCAACCGCTTTTCTCCCATTTGGTTGGGGTCCTCGAATATGCATAGGTCTAAACTTTGCCATGATCGAGGCAAAAATGGCATTATCAATAATCCTACAACGCTTCTCATTTGAGCTTTCTTCATCCTATACTCACGCTCCTACCGCCTCTTTAACAACCCAACCTCAACATGGAGCTCATCTTGTCCTACACAAACTCTAG 1188 40.07 MSISIWIIVLCSIVLGLGWKFVDWIWVKPKKLEKLLRQQGFAGNSYRILYGDLKDRAAMRDQAISKPMNFSNHIAPRVIPSVYHTIHNYAFGSSYEEGKKIFKLQTELAHLVIQSTLGIYIPGWRFLPTKSNNKMKEMSKEITTLILGIINERQKSMKAGEAIHSDLLGLLMESNFNEIREHGNNKDIGMSIEDVIEECKIFYIAGQETTATLLIWTMVLLSSYSEWQERARAEVFEVFGNKKPDYDGLSRLKVVTMILNEVLRLYPPVTLLARLVKKETRLGKLTLPAGVMLGIPVILLQRDHELWGADADEFKPERFSEGVSKATKNPTAFLPFGWGPRICIGLNFAMIEAKMALSIILQRFSFELSSSYTHAPTASLTTQPQHGAHLVLHKL 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 80097397 80101207 - Hsped.01g14810.1 Hepe01g1481 560591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1481 395 SUPERFAMILY Cytochrome P450 65 393 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1481 395 Gene3D Cytochrome P450 47 395 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1481 395 PRINTS P450 superfamily signature 257 268 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1481 395 PRINTS P450 superfamily signature 334 343 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1481 395 PRINTS P450 superfamily signature 205 222 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1481 395 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1481 395 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 336 345 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Hepe01g1481 395 PANTHER CYTOCHROME P450 FAMILY MEMBER 85 388 IPR050665 GO:0004497(PANTHER)
Hepe01g1481 395 Pfam Cytochrome P450 72 370 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1481 395 PRINTS E-class P450 group I signature 81 99 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1481 395 PRINTS E-class P450 group I signature 214 240 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1481 395 PRINTS E-class P450 group I signature 333 343 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1481 395 PRINTS E-class P450 group I signature 343 366 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1481 395 PRINTS E-class P450 group I signature 194 211 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe01g1481 395 PRINTS E-class P450 group I signature 256 274 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1481 Hepe-Chr1:80097397 Hepe09g1571 Hepe-Chr9:42736561 3.45e-186 dispersed
Hepe01g1480 Hepe-Chr1:80089616 Hepe01g1481 Hepe-Chr1:80097397 2.72e-250 tandem
Hepe01g1481 Hepe-Chr1:80097397 Hepe01g1482 Hepe-Chr1:80106804 2.34e-256 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1481 - - - 0.0