Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1487 ATGCCGACACGTATCGGACACAGCAGCATTTCAGAACCTGTCTCGTCACTTTACGGATGGGATTCGATTCGTTTGTTCTTATTGAAGAGATTGCCATGTGGGAATTTGGTTCCGATTGGTGATTTTAGTGAAGTGTTAAAGAAGGTCATCTTTTCTGTTAATCTTAAAGTGGGATTTGGAGGAAGATTGATTCTAATGGAGGTTTCGATCATGCTTCATGTGGGATTCGTCCTTTTTGTTCTCTGGCTACTTTCCACCTTCAATTGCTGCCATCTTGCTGCATATTTCATCTCCCTCATCTATCTCTATCTGGTACACGAGCGGTTCTTTTTGAAACTGAAGAGGAAATTGCAATTTGAGGAGAGAAAGCAAGCTAATCAGAGAAAGGTTCTTACAGATTCTGAAACAGTTAGATGGTTAAACCATGCGGTTGAAAAGATATGGCCTATATGCATGGAGCAAATTGCTTCTCAGAAGATTCTCCTCCCTATCATTCCTTGGTTCTTGGAGAAGTACAAACCATGGACTGCTAAGAAGGCTGTGGTTCAACATCTATATTTGGGAAGAAACCCGCCTATGTTTACTGAAATGAGGGTTCTTCGTGAGGCTAGCGAGGATGACCACTTGGTTCTGGAGTTAGGAATGAACTTTCTTACAGCTGATGATATGAGTGCAATACTTGGTGTGAAGCTAAGGAAAAGACTAGGATTTGGAATGTGGGCAAAGTTGCATCTAACAGGCTTGCATGTGGAAGGAAAGGTTCTGGTCGGTGTTAAGTTCCTTCGGGATTGGCCATACATCGGTCGTATTCGATTATGTTTTGCTGAGCCTCCATATTTTCAGATGACTGTCAAACCTATCTTTACGCATGGTCTTGATGTTACCGAACTTCCAGGAATTGCTGGATGGCTGGATAAGCTTTTGTCCATTGCCTTTGAGCAGACACTTGTTGAGCCCAATATGTTGGTTGTTGACATGGAGAAGTTCGTTTCACCACAGCCAGAAACTTGGTTTTCTGTAAATGTGAGGGAACCAGTTGCCTATGTCGTCGTCGAAGTTGTTGAAGGAGCAGACATGCAACCATCTGATCTAAATGGTCTGGCTGATCCGTATGTAAAAGGTCAATTGGGTCCTTACAGATTCAGAACCAAAATTCAAAAGAAAACACTGTCTCCACAGTGGCGTGAGGAATTCAAGATCCCAATTGTCACATGGGAGTCGGAGAATGTTCTTGCTATTGAAGTTCGTGACAAGGACACGTTTGTTGACGACGTGCTTGGAAATTGTACTATCAGCATTGTGGACCTAAGGGATGGCAAACGACATGATATCTGGTTGCCTCTTGAAAACATTAAAACGGGGCGATTGCATCTTGGAATCACTGTTTTTGAAGACAAAAAGAAGATGGAGGAGTATCCTTCTCCCAAAGAAGCCTCAAATGTGGAAGAGCCTCGTAAGGATTCTCCTAGCAGTGAGACCAAGGATGATAAGGATTCAATCTCGACTGTATCAGTGGAGCCTCAAAGAGGGATTGACAATTTTGAGGCCATCGACGTTGAAGGGCAAAAGGAGACAGGAATATGGGTCCACCGTCCAGGAAGCGAAGTTTCAAAAACTTGGGAGCCTCGGAAGGGACGAAGTCGGCGACTTGATACTGAAATTCATAGGAAAAGCTTAAGCAGTGGTGAGATAAGATCCTTTAATAATGATTCTAGCAGCACTGATGATAATCCTGAGGAAAAACATGGAAGGTTATCAGTTCGCAGGGGACTGAGAAAGTTGAGTTCAGTTTTTCACAGGAGTCCTCGGGATGGGGATCGATCAGGAAGTTTAGAGGAGTCGTATGCGAAATCCCCTCAATATGCCAATGTTAGGGCTGCAAATTCCAAGGAGGGAGGCGTGAAGGTTATTCTTGTAGATAACATATCTGGGACTGCTTCTGATAAGGTATCAAAAGATGGGAAATCGAGCCACGATGGTAGCGATTCAGAAAGTCCTGGAAAGGATGGTAATGTGAAAGGCATGGCGAAGAGCTTGTTCAGACAGGCTGAGAAATCTGCTCGTAGTATTAAACACGCATTTTCGCGCAAAGGGTCGAGGAAATTTCAAAGTGATTTATCGGGGATGAATGAGAGAGATGCTGCAGTGGAATCAGAGTCTTCAGAAGGACCTGATGCACCAGCTGCTTGCAGCCCAACAACAATTGTAGGAGTTCCAGTTATCCCCGTAGCCACAGCCTCAACTCCTCACAACAATTCCTTCAAGAAGAAAAATGTGCTGCCCATGCCCACTGGTTCAAGTGACAATGTGAAGGATGATGATCAATCGGCCAATAAGAGTCCTGCCGCTCGCTTGGAAAAAATAGAAGACGACGAGGATGATAAACCTGCAATCAACAGTGACAAATGA 2409 44.0 MPTRIGHSSISEPVSSLYGWDSIRLFLLKRLPCGNLVPIGDFSEVLKKVIFSVNLKVGFGGRLILMEVSIMLHVGFVLFVLWLLSTFNCCHLAAYFISLIYLYLVHERFFLKLKRKLQFEERKQANQRKVLTDSETVRWLNHAVEKIWPICMEQIASQKILLPIIPWFLEKYKPWTAKKAVVQHLYLGRNPPMFTEMRVLREASEDDHLVLELGMNFLTADDMSAILGVKLRKRLGFGMWAKLHLTGLHVEGKVLVGVKFLRDWPYIGRIRLCFAEPPYFQMTVKPIFTHGLDVTELPGIAGWLDKLLSIAFEQTLVEPNMLVVDMEKFVSPQPETWFSVNVREPVAYVVVEVVEGADMQPSDLNGLADPYVKGQLGPYRFRTKIQKKTLSPQWREEFKIPIVTWESENVLAIEVRDKDTFVDDVLGNCTISIVDLRDGKRHDIWLPLENIKTGRLHLGITVFEDKKKMEEYPSPKEASNVEEPRKDSPSSETKDDKDSISTVSVEPQRGIDNFEAIDVEGQKETGIWVHRPGSEVSKTWEPRKGRSRRLDTEIHRKSLSSGEIRSFNNDSSSTDDNPEEKHGRLSVRRGLRKLSSVFHRSPRDGDRSGSLEESYAKSPQYANVRAANSKEGGVKVILVDNISGTASDKVSKDGKSSHDGSDSESPGKDGNVKGMAKSLFRQAEKSARSIKHAFSRKGSRKFQSDLSGMNERDAAVESESSEGPDAPAACSPTTIVGVPVIPVATASTPHNNSFKKKNVLPMPTGSSDNVKDDDQSANKSPAARLEKIEDDEDDKPAINSDK 802
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 80144088 80149604 + Hsped.01g14870.1 Hepe01g1487 560597

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1487 802 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 65 779 IPR052847 -
Hepe01g1487 802 MobiDBLite consensus disorder prediction 469 502 - -
Hepe01g1487 802 MobiDBLite consensus disorder prediction 536 733 - -
Hepe01g1487 802 MobiDBLite consensus disorder prediction 469 514 - -
Hepe01g1487 802 MobiDBLite consensus disorder prediction 745 802 - -
Hepe01g1487 802 SMART C2_3c 348 445 IPR000008 -
Hepe01g1487 802 Pfam C2 domain 348 448 IPR000008 -
Hepe01g1487 802 Gene3D C2 domain 333 464 IPR035892 -
Hepe01g1487 802 MobiDBLite consensus disorder prediction 772 802 - -
Hepe01g1487 802 MobiDBLite consensus disorder prediction 536 560 - -
Hepe01g1487 802 MobiDBLite consensus disorder prediction 745 771 - -
Hepe01g1487 802 CDD SMP_SF 157 325 - -
Hepe01g1487 802 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 339 464 IPR035892 -
Hepe01g1487 802 ProSiteProfiles C2 domain profile. 332 446 IPR000008 -
Hepe01g1487 802 MobiDBLite consensus disorder prediction 651 666 - -
Hepe01g1487 802 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 133 327 IPR031468 GO:0008289(InterPro)
Hepe01g1487 802 MobiDBLite consensus disorder prediction 597 611 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1487 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g874 Blo03g00728 . . . . . . . . . . . . . . . . Bhi09g03594 . . . Hepe01g1487 . . . . . . . . . Cone6ag0227 Cone9ag0260 . . Lsi04g01952 . . . . Blo10g00713 . Bda12g00801 . . Bma07g01119 . . . Cmo09g00683 . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004301 1 2 4 3 2 0 2 1 0 1 1 1 2 1 1 2 1 3 1 1 1 1 1 1 1 1 1 2 1 1 41