Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe01g1519 ATGATAATGGAGCAGTTAAAATACTGCCTCCTCCTTCAGATATTTGTTGCTTTAGCTATTTCATTTCTGGTTAGCGCACAGGATCAATCAGGATTCATTAGCATTGACTGTGGAATTTCAAAGAATTCAAGCTACACAGACAGTGTAACAGGCATAGAGTACATTTCTGATGCAAATTTCACAGAAACTGGAATAAGTAAGAGCATATCATCAGATTTCAACACTACCACTCTTCCACAGCAATTCTGGTATGTTAGAAGCTTCCCTGAAGGGGATAGAAACTGTTACATTATAAAGCTTGCTCAAGGTAAAGGTTACAAGTATTTGATCAGAGCGAGTTTCATGTACGGAAACTATGACGGCGAAGGTAAAGCGCCGGTTTTTGATCTGTACGTGGGAGTTAATAAATGGGATTCAGTAGTACTGAACAATGAATCCAGTATCATAATCAAAGAAGTTATACATACACTTCCTACATCTTCTGTTTGCATATGTCTGGTGAATACTGGCTTTGGATCACCTTTTATATCAGCATTGGAGCTTAGGCTTTTGAAAAATGCTAGTTATGTGACTGAGTTCGATTTGTTAGCGCTCCACAGACGGTTGGACGTGGGATCGACGACCAACAAAACGGTCAGGTACAATGATGATTTTTGTGATCGGATTTGGTTGCCCTTTAACTTTCTTAATTACAAAATTATAAGCACTTCATCCACAGTTGATCCAGGAAATAGCAACAGTTATAATTTACCAAGAATTGTAATGAGCACTGCTATCACAACAGAAAATGTCAGTGCTCCTCTAGAGTTTACCTGGGTTCCCGAAGATCCCAGTACCAAATATCATATATTCTTGCACTTTGCTGATTTGGAAAAGCTCCAAGCCAATCAATCAAGGCAATTTAACATCTTTCTAAATGGGAATTCTTTTTATGGACCTTTCTCTCCTGATTACATGCAGTCAACTACATTGTTTAGCACAAACCCAATGAGTGGAGATACTATTACATTTTCATTATTAAAAACTAGTGCATCAAATCTTCCACCCATCCTCAATGCTCTTGAAGTTTACAGGGGGGTAGATACAACACAATCACGCACTGATGAGCAGGACGTTACAGCTCTGATGAACATCAAATCATTTTATGTTGTGAGAAAGAATTGGCAGGGTGATCCATGCCTGCCACAATCCTTCTTGTGGCAAGGTCTTAATTGTAGCTATGATGACCAGAGTCCTAGTAGAATCACCTCCTTGAACTTATCTTCGAGTGGATTAGTGGGGGAAATAGCTACTTACGTATCTGAGCTCACATCATTACAATATTTGGATTTATCAAACAATAGCTTGAGTGGACCGGTGCCTGGTTCGTTATCCGAGTTGCAGTCCTTGAAAGTTTTAGACTTGAGGGACAACCCACTCCTTGGTTCTATACCAAGCGAACTCATGGAAAGATCAAAGAATGGATCCCTTTTAATAAGGGTTGGAGGAAACACCGATCTTTGTGCTTCATCTTCTTGCCAAGAGAAGAAGAAGAGTTACATTATTCCAATTGTAGCAATAGTTTCATCATTGCTGGTCCTCTTAACTGCAACAGCAGTCTGGATCATAAGATGGAGAAAACAAGCCCGAAAGCAGCCCGCCATAATACTCGGATCACTAGAGCCAAAGAAACAGCAGCTACCTTACTCACAAATACGGCGTATGACAAACAACTTTGAGACGAAAATCGGGGAAGGAGGATTTGCCAAAGTATTCCTGGGTTACTTGGATAACACTCAAGTTGCTGTGAAGGTCCTCAAATCTTCGGTTCATGGTCATAAAGAATTTGAAGCAGAGGTTACACTTTTGCTGAGAATTCATCATACAAAGTTAACTAGCCTTGTTGGATACTGCTATGAAAAAGGCAACCTAGTACTTATCTATGAGTACATAAATAATGGCAACTTAAAAGAACATCTATCAGGTGGAGATGTTAGAGTTCTCAGTTGGGAAGAAAGGATGCAAGTAGCTGTCAATTCAGCGGAAGGATTGGAGTATCTGCATCATGGTTGTAAGCCACCAATTGTTCACAGAGATGTGAAATCTGCAAACATCCTTTTGAATGAAAAATTCCAAGCCAAAATAGCTGATTTTGGTCTATCCAAGAGTTTTCAGACCGAAAGTCAGACTCATTTGACGACAGTTGTTGCAGGCACCGATGGTTACCTTGATCCCGAGTATTATGCAACTGGCTGGTTGACAGAGAAAAGTGATGTTTACAGTTTTGGAGTTCTTATATTGGAAATAATCACTTCCCTTCCAGTCCTTAAAATTGATAGAGCTTCTTCAGAGAGATATCATATAAGCCAATGGGTTATGCACTGGATGGAAACAGGTGATATAAGGAGCATTGTTGATCAAAAACTAAGAGAAAACTTTGACTTGACTTCTGCTTGGAAGGCTGTGGAGATTGCAATGAAATGTTTGTCATTGAATTCTGTTGAGAGGCCAAGCATGAAAGAGGTGGTTACGGAGTTGAGCGAGTGTTTGACGTTAGAGAGAGCTCGGAAAATAATAAACGTCGATTCTACTACGCGAAGATCAAATGCAGTTAGTAGAAACTTCAGAGAGAGCGAAGTAACACCTCATGCTAGATAG 2637 39.86 MIMEQLKYCLLLQIFVALAISFLVSAQDQSGFISIDCGISKNSSYTDSVTGIEYISDANFTETGISKSISSDFNTTTLPQQFWYVRSFPEGDRNCYIIKLAQGKGYKYLIRASFMYGNYDGEGKAPVFDLYVGVNKWDSVVLNNESSIIIKEVIHTLPTSSVCICLVNTGFGSPFISALELRLLKNASYVTEFDLLALHRRLDVGSTTNKTVRYNDDFCDRIWLPFNFLNYKIISTSSTVDPGNSNSYNLPRIVMSTAITTENVSAPLEFTWVPEDPSTKYHIFLHFADLEKLQANQSRQFNIFLNGNSFYGPFSPDYMQSTTLFSTNPMSGDTITFSLLKTSASNLPPILNALEVYRGVDTTQSRTDEQDVTALMNIKSFYVVRKNWQGDPCLPQSFLWQGLNCSYDDQSPSRITSLNLSSSGLVGEIATYVSELTSLQYLDLSNNSLSGPVPGSLSELQSLKVLDLRDNPLLGSIPSELMERSKNGSLLIRVGGNTDLCASSSCQEKKKSYIIPIVAIVSSLLVLLTATAVWIIRWRKQARKQPAIILGSLEPKKQQLPYSQIRRMTNNFETKIGEGGFAKVFLGYLDNTQVAVKVLKSSVHGHKEFEAEVTLLLRIHHTKLTSLVGYCYEKGNLVLIYEYINNGNLKEHLSGGDVRVLSWEERMQVAVNSAEGLEYLHHGCKPPIVHRDVKSANILLNEKFQAKIADFGLSKSFQTESQTHLTTVVAGTDGYLDPEYYATGWLTEKSDVYSFGVLILEIITSLPVLKIDRASSERYHISQWVMHWMETGDIRSIVDQKLRENFDLTSAWKAVEIAMKCLSLNSVERPSMKEVVTELSECLTLERARKIINVDSTTRRSNAVSRNFRESEVTPHAR 878
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 80407148 80414940 - Hsped.01g15190.1 Hepe01g1519 560629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe01g1519 878 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 644 851 - -
Hepe01g1519 878 Gene3D Phosphorylase Kinase; domain 1 533 643 - -
Hepe01g1519 878 ProSiteProfiles Protein kinase domain profile. 570 843 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1519 878 PRINTS Leucine-rich repeat signature 439 452 - -
Hepe01g1519 878 PRINTS Leucine-rich repeat signature 460 473 - -
Hepe01g1519 878 ProSitePatterns Serine/Threonine protein kinases active-site signature. 688 700 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g1519 878 Gene3D Ribonuclease Inhibitor 370 492 IPR032675 -
Hepe01g1519 878 Gene3D - 199 360 - -
Hepe01g1519 878 FunFam Leucine-rich repeat receptor-like kinase 370 503 - -
Hepe01g1519 878 Pfam Protein tyrosine and serine/threonine kinase 572 839 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe01g1519 878 SMART serkin_6 570 843 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe01g1519 878 ProSitePatterns Protein kinases ATP-binding region signature. 576 597 IPR017441 GO:0005524(InterPro)
Hepe01g1519 878 Gene3D Transferase(Phosphotransferase) domain 1 644 865 - -
Hepe01g1519 878 CDD STKc_IRAK 576 841 - -
Hepe01g1519 878 PANTHER OS07G0107800 PROTEIN-RELATED 25 846 - -
Hepe01g1519 878 SUPERFAMILY L domain-like 372 481 - -
Hepe01g1519 878 Pfam Malectin-like domain 35 358 IPR024788 -
Hepe01g1519 878 SUPERFAMILY Protein kinase-like (PK-like) 553 839 IPR011009 -
Hepe01g1519 878 Pfam Leucine rich repeat 414 473 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1519 Hepe-Chr1:80407148 Hepe03g1490 Hepe-Chr3:71729185 8.06e-249 dispersed
Hepe03g1491 Hepe-Chr3:71748266 Hepe01g1519 Hepe-Chr1:80407148 2.32e-23 dispersed
Hepe01g1519 Hepe-Chr1:80407148 Hepe03g1488 Hepe-Chr3:71709024 3.95e-231 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72477 PF12819 Malectin_like 1.00E-112 CL0202 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe01g1519 - - - 0.0